Pediculus humanus corporis (human body louse): Phum_PHUM369790
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Entry
Phum_PHUM369790 CDS
T01223
Name
(RefSeq) DNA-directed RNA polymerase III largest subunit, putative
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Phum_PHUM369790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phu03021
]
Phum_PHUM369790
Enzymes [BR:
phu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Phum_PHUM369790
Transcription machinery [BR:
phu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
Phum_PHUM369790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
8233580
NCBI-ProteinID:
XP_002428200
VectorBase:
PHUM369790
UniProt:
E0VQ06
LinkDB
All DBs
AA seq
1364 aa
AA seq
DB search
MVKEQYRETNIAKMISHVCFGVDSPEVIQQQAHIHVVGKNLYNQDAPRTPVAYGVLDRQM
GTNTKDATCTTCNKGLADCIGHFGYINLELPVFHIGYFRSVIMILQTICKTCSKVLLPED
LKKTYRLRLQNPKFLYLARKALRKQIHEKAKKISICPYCQSLNGVVKKCGLLKLVHEKFR
GSKSTTDALMAKHIQAYNNVLEYDRELESVIASGVAFILTPLDVLNLLERIPEDDVCLLC
MNPAMVHPRDLMLTRLPVPPLCVRPSVISELKSGTNEDDLTMKLSEIIFINDVIQKHRQS
GAKVHMINEDWDFLQLHCALYINSETTGIPLSMQPKKATRGLVQRLKGKQGRFRGNLSGK
RVDFSSRTVISPDPNLQIDQVGVPEHVAKILTFPEKVNRANIFLLRELVRNGPDTHPGAN
FVEDRNGNSKRYLRYGNRSKISSELKFGDVVERHLIDDDIVLFNRQPSLHKLSIMAHRAK
VLKHRTFRFNECVCTPYNADFDGDEMNLHLPQTLEAKAEALVLMSNKANLATPRNGELLI
AATQDFITGAYLLTQKNTFFTQAKANWLLACILAGKDANLHIDLPPPAIIKPMRLWTAKQ
IFSVILKPNKKCKIVCNLRTKGKAYTSREEMCVNDSFVLIRNSVLLAGTMDKGTLGSGSK
DNILYILLRDWGEDAAATVMWRLARIASWFLMNRGFSIGLGDVTPGVGLLRAKEKLLNAG
YSKCVEYIKAMEAGKLPCQPGCTIDETLEAVILKELSVIRDHAGKACLQELHSSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGKRVPDKFENRALPQFERYTKIPAAKGFVENSFYS
SLTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKALEDLCVQYDMTVRNSMGEIIQF
NYGGDGLDPTYMEGKDCPVNFQRTLDHIRAKYPYREEEALDSISVEKATDELLNTEEFGV
CDDVFKFDLKNFMSGIVRKMALTRQKFGYNERNLSDIPKAIIQIERLTVSQIVEFFQICR
KKYLRAKVEAGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINASKK
ISTPIITAYLENDSDAEFARRVKGRIEKTTLGEISEYIEEVFLPDDFFIIVKLDVDRIKL
LKLEVDANSIKYTLCTARLKVNVEVVSDTILKVTPIKTKNADRINYVLQSLKKSLPNIVI
KGLSAVNRAVIHHDDSKGGTKYKLFVEGYNLGEVMATNGVLGTKTTSNNIFEVFTYLGIE
AARQTIISEIKMVMENHGMSIDRRHIMLLADLMTSRGEVLGITRHGLVKMKESVLNLASF
ERTADHLFDAAYYGQTDAITGVSESIIMGLPVSVGTGLFKLEKR
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagaacagtatagagaaactaatatagccaaaatgatatcacatgtttgtttt
ggagtagacagccccgaagtcattcagcaacaagctcatattcatgtggttggtaaaaat
ctttacaatcaagatgctcccagaacacctgttgcttatggagtattggacaggcaaatg
ggaaccaatactaaagatgcaacttgcacaacttgtaacaaaggtttggcagattgtata
ggtcattttggttacataaatctagaactacctgtatttcatattggttactttcgatct
gtcatcatgatactacagacaatatgcaagacctgctctaaagttttacttccagaggat
ttgaaaaaaacatataggttaaggctacaaaatcctaaatttttatatttagctagaaaa
gcattaagaaagcaaatacatgaaaaagcaaaaaaaatttcaatttgcccttattgtcaa
agtcttaatggagttgtcaaaaaatgtggattgttaaaattagttcatgaaaaattcagg
ggaagcaaatctaccacagatgctttgatggctaaacatattcaggcttacaacaatgtt
ttagaatatgatagagaattagaaagtgtgattgcaagtggtgtagcatttatcttaact
cctttagatgttttgaatttgttggagagaatacctgaagacgatgtttgtctgctatgc
atgaatccagcaatggtacatcctagagatttaatgcttacaagattgccagttcctcct
ttatgtgttcgtccatctgtgatttcagaacttaaatctggtacaaatgaagatgattta
acaatgaaactatctgaaataatttttattaatgatgtcattcaaaaacatagacaatca
ggagcaaaagttcatatgataaatgaagattgggattttttacaacttcattgtgcatta
tatattaatagtgaaaccacaggtatacctcttagtatgcaacccaaaaaagctacaaga
ggattagttcaaaggcttaaaggaaaacaaggtcgatttcgagggaatctttctggaaaa
cgagtggatttttcaagtagaacagtaatatcaccagacccaaatcttcaaattgatcaa
gtaggtgttcctgaacatgttgcaaaaatattaacatttccagaaaaagttaatagggca
aatatttttttattacgagaattagtgagaaacggacctgacacccatcctggggctaat
tttgtggaagatcgcaatggaaatagtaaacggtatttgcgttacggtaatagaagtaaa
atatcatcagaacttaaatttggagatgttgtcgagcgtcatttgatagatgatgatatt
gtgctatttaatcgtcaaccaagtttacataaactcagtattatggctcatcgggctaaa
gttcttaagcacagaacttttcgttttaatgaatgcgtttgtacgccgtataatgctgat
tttgatggggatgaaatgaatttacatttacctcaaacccttgaggctaaagcagaagct
cttgtgttaatgagtaataaagcaaatttagcaactcctaggaatggagaactgttaatt
gctgccactcaagattttatcacaggcgcatatttattaacacaaaaaaatacttttttc
actcaagctaaagccaattggttattggcttgtattttagctggaaaagatgcaaatcta
catattgatctcccaccaccagctattataaagcccatgcggttgtggacagcgaaacaa
attttcagtgttattttaaaaccgaataaaaaatgtaaaatagtttgtaatttaagaact
aaaggaaaagcttatacttcgcgggaggagatgtgcgttaatgattcatttgttttaatt
agaaattccgtgttattagccggaacaatggataaaggaacattaggttcaggatcaaaa
gacaatatcctgtatattctcttacgagattggggagaagatgcagctgcaactgtcatg
tggagattggctagaatagcatcttggtttttgatgaatagaggcttttccattgggctg
ggagacgttactcctggagtcgggcttttaagagccaaggaaaaattattaaacgctggg
tactcaaaatgtgtagagtacattaaagcaatggaagcgggaaaattaccgtgccaacct
ggctgtactattgatgaaacattagaagccgttatacttaaagaattatcagttatcagg
gatcatgctggtaaagcttgtcttcaagagcttcattctagtaacagtccgcttatcatg
gcattgtgcggatcgaaagggtcatttattaacatttctcaaatgatagcctgcgtaggt
caacaagctataagtggaaagcgtgttcctgacaaatttgaaaatagagcactaccgcaa
ttcgaaagatacactaaaataccggctgctaaaggttttgtagaaaacagtttttattct
tcccttacacctacggagtttttttttcatacaatgggagggcgagagggattagtcgat
actgcagtaaaaaccgctgaaactggttacatgcaacgacgtttggttaaggcattagaa
gatttgtgcgttcaatatgatatgacggttagaaactccatgggagagattattcaattt
aactacggaggtgacggactagatccaacttacatggaaggaaaggattgcccggtgaat
tttcaacgaactttggatcacatcagagcaaaatatccttacagagaggaagaggcgtta
gattcaatcagcgttgaaaaagcaaccgatgaattgctaaacacggaagaattcggagtt
tgtgacgacgtatttaaattcgatttaaaaaatttcatgagcggaatagttcgaaaaatg
gcgttaacgagacaaaaattcggatataacgaaaggaacctatcagacattccgaaagca
ataatacaaatcgagcgtttgaccgtcagtcaaatcgtggaattttttcaaatttgcaga
aaaaaatatttaagagccaaagtcgaagctgggacagctgttggagctttagcagctcaa
agtatcggcgagccaggtactcaaatgactttaaaaacttttcattttgccggtgtggct
tcaatgaacatcactcaaggagttccccgcataaaagaaataattaatgccagtaaaaaa
atcagcactccaataataacagcatatttagaaaatgattcagatgctgaatttgctcga
agagtaaagggaagaattgaaaaaacgacattgggtgaaatatcggaatatatagaagaa
gtatttttgcctgatgattttttcataatagttaaattagatgtcgaccgaataaaactt
cttaaattagaagtggatgccaattcgattaaatacactttatgcacggctaggcttaaa
gttaacgtcgaggttgtgagtgacaccattttaaaagtgactccgatcaaaacaaaaaac
gcggatcgtattaattacgtactccaatccctaaaaaaaagtcttccgaatatcgtgata
aaaggtctgagcgctgtgaacagagccgtcatacatcacgatgacagcaagggtggaaca
aaatacaaattgtttgtcgaaggctacaatttaggtgaagttatggctaccaacggagtt
ttgggtaccaaaacaacatctaataatattttcgaagtttttacgtatttgggcatagaa
gctgcgaggcaaacaataatttccgaaataaaaatggttatggaaaatcacggtatgagt
atcgatcgaagacatataatgcttttggccgatttgatgacaagtcgaggagaggttctc
ggtataaccaggcacggtttggttaaaatgaaagaatccgttttaaatctcgcatcgttc
gaacgaacagcagatcatttattcgatgcagcatattatggacaaacggatgcgattacg
ggagtaagcgaatccatcatcatgggcctacccgtatcggtcggcacaggattgttcaaa
ctcgaaaaaagatga
DBGET
integrated database retrieval system
