Pseudomonas hygromyciniae: JTY93_20820
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Entry
JTY93_20820 CDS
T09404
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
phyg
Pseudomonas hygromyciniae
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyg03009
]
JTY93_20820 (rimO)
Enzymes [BR:
phyg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JTY93_20820 (rimO)
Ribosome biogenesis [BR:
phyg03009
]
Prokaryotic type
ribosomal protein modification factors
JTY93_20820 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QSB42365
LinkDB
All DBs
Position
4657790..4659118
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AA seq
442 aa
AA seq
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MAKANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDSAKAE
SLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHDVVPPRQD
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDEAQRL
VKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSSLGVWVRLHYVYPY
PHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWRQICPELIIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDLAVVPDDVKQDRW
ERFMAHQQAISSARLQLRIGKEIEVLIDEVDEQGAVGRCFFDAPEIDGNVFIDDASGLKP
GDKVWCTVTDADEYDLWAQKRD
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atcgcaaaagccaaccccaaggttggctttgtttccctgggttgcccgaaggctctggtc
gactccgagcgcatcctcacgcaactgcgcatggaaggctacgacgtcgtgtccacctac
caggacgccgacgtggtggtggtcaacacctgtggcttcattgactcggccaaggccgag
tccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatcgttaccggctgc
atgggtgtggaggaaggcaatatccgcaacgtgcacccaagcgtattggccgtgaccgga
ccgcagcagtacgagcaggtggtcaacgccgtgcacgatgtggtgccgccgcgccaggac
cacaacccactgatcgacctggtgccgccacaaggcatcaagctgaccccgcgccattat
gcgtacctgaagatttccgaaggctgcaaccacagctgcagcttctgcatcatcccatcg
atgcgcggcaagctggtcagccgcccggtgggcgatgtattggacgaagcccagcgcctg
gtcaagtctggcgtcaaagagctgctggtgatctcccaggacaccagcgcctacggcgtc
gacgtgaaataccgcaccgggttctggaacggcgcgccggtgaaaacccgcatgaccgaa
ttgtgcgaagccttgagcagcctgggtgtgtgggtgcgcctgcactacgtctatccatac
ccgcacgtcgacgagttgatcccgctgatggccgccggcaagatcctgccgtacctggac
atcccgttccaacacgccagcccgaaagtgctcaaggccatgaaacgcccggcctttgaa
gacaagaccctggcgcggatcaagaactggcgccagatctgcccagagctgatcatccgt
tcgacctttatcgtcggcttccccggcgaaaccgaagaagacttccagtacctgctggat
tggctgaccgaagcccagctcgatcgcgtcggctgcttccagtactcgccagtggaaggt
gcgccagccaacctgctggacctggccgtggtgccggatgacgtcaagcaggaccgttgg
gagcgtttcatggcccatcagcaggccatcagctcggcacgcctgcaactgcgcatcggc
aaggaaatcgaagtactgatcgacgaagtggacgagcaaggcgcggtcggccgttgcttc
ttcgacgctccggaaatcgacggtaacgtatttatcgacgacgccagcggtctcaagcca
ggcgacaaggtgtggtgcacggtcaccgacgccgacgagtacgatctctgggcgcaaaaa
cgcgactaa
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