Pseudomonas hygromyciniae: JTY93_25025
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Entry
JTY93_25025 CDS
T09404
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg00260
Glycine, serine and threonine metabolism
phyg01100
Metabolic pathways
Module
phyg_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JTY93_25025
Enzymes [BR:
phyg01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
JTY93_25025
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
JTY93_25025
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_binding_2
FAD_oxidored
NAD_binding_8
DAO
HI0933_like
Pyr_redox_3
GIDA
FAD_binding_3
Thi4
Pyr_redox
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QSB39377
LinkDB
All DBs
Position
complement(5529756..5532773)
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AA seq
1005 aa
AA seq
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MSQINRLSNGGRIDRNKVLTFTFNGQSYKGFEGDTLAAALLANGVDVIGRSFKYSRPRGI
FAAGAEEPNAVLQIGATEATQIPNVRATQQALYQGLVATSTNGWPSVNNDMMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTENDPDTYDYMNRHCDVLIVGAGP
AGLSAALAAARSGARVIIADEQEEFGGSLLDSRESLDGKPAAEWVASVIAELKALPDVVL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGVVRQRIHRVRAKRVVLATGACERPLVYG
NNDVPGNMLAGAVSTYVRRYGVAPGKKLVLSTNNDHAYRVALDWFDAGLSVVAVADARHN
PRGALVEEARAKGIRILTGSAVIEARGSKHVTGARVAAIDVKAHTVTSPGEWLDCDLVAS
SGGYSPVVHLASHLGGKPTWREDILGFVPGEAPQKRVCVGGINGVYGLGDSLADGFEGGV
RAASEAGFAAVEGTLPKALTRLEEPTLALFQVPHEKATARAPKQFVDLQNDVTAAAIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVTIPQMGTTMFRPNYTPVTF
GAVAGRHCGHIFEPVRYTALQAWHVKNGAEFEDVGQWKRPWYFPRNGEDLHAAVKRECLA
VRDSVGLLDASTLGKIDIQGPDAREFLNRIYSNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFLMTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATMTLSGPNSRKL
LSEVTDIDLDKDGFPFMTWKEGLVGGVPARVFRISFTGELSYEVNVQADYAMGVLEQIVE
AGKQYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTPDDLNMGWCVGRTKPFSWIGWRGM
NREDCVREERKQLVGLKPIDPKVWLPEGAQLVFDPKQTIPMKMVGHVTSSYAHNSLGYSF
AMAVVKGGLKRMGERVFSPQADGSVIEAEIVSSVFFDPKGDRQNI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagccagatcaatcgcctgtccaacggtggccgcattgaccgtaataaagtcctgacg
tttaccttcaacggccagagctacaaaggctttgaaggcgacaccctggctgcagccttg
ctggccaacggcgtggatgtcatcggccgcagcttcaaatactcgcgcccacgcggcatc
tttgctgcgggcgctgaagagccaaacgcggtgctgcagatcggtgccaccgaagccacg
caaatccccaacgtgcgcgccacgcaacaggcgctgtaccaaggcctggtcgcaaccagc
accaacggctggccgagcgtgaacaacgacatgatgggcattctcggcaaggtcggcggc
aagctgatgccgccgggtttctactacaaaaccttcatgtacccgcaatcgttctggatg
acctacgagaagtacatccgcaaggccgcagggctgggtcgctcgccgaccgagaacgat
ccggacacctacgactacatgaaccgccattgcgacgtgctgatcgtcggtgccgggccc
gctggcctgtcggcggccctggcggctgcgcgcagtggtgcgcgggtgatcatcgccgat
gagcaggaagagttcggcgggtcgttgctcgactcccgtgaaagcctcgacggcaagccg
gcggccgagtgggtcgccagtgtgattgccgagctcaaggcgttgccggatgtggtgctg
ctgcctcgcgccaccgtcaacggctatcacgaccataacttcctgaccatccacgagcgc
ctcaccgatcacctcggcgaccgtgcgccgatcggcgtggtgcgccagcgtatccaccgt
gtgcgtgccaagcgcgtggtgctggcgaccggtgcgtgcgagcgcccgctggtgtacggc
aataacgacgtgccgggcaacatgctggcgggtgcggtgtcgacttacgtgcgccgttac
ggcgtggcgccgggtaaaaagctggtgctgtcgaccaacaacgatcacgcctaccgcgtg
gcgctggactggtttgacgcgggcctcagcgttgtcgccgtggccgatgctcgccacaac
ccacgcggtgcgctggtggaagaagcccgtgccaaaggcattcgcatcctcaccggcagc
gccgtgatcgaagcccgtggcagcaagcacgtgactggtgcgcgtgtggcggctatcgat
gtcaaagcccacaccgtcaccagccctggcgaatggctcgattgcgacctggtagccagc
tccggcggctacagcccggtggttcacctggcctcgcacctgggcggcaagccgacctgg
cgtgaagatatcctcggttttgtaccgggcgaagcaccgcagaaacgtgtgtgcgtcggt
ggcatcaacggcgtctacggcttgggtgattccctggctgacggctttgagggtggcgtg
cgtgccgccagcgaagccgggtttgccgcggtggaaggtacgctgcccaaggccctgacg
cgcctggaagagccaaccctggcgctgttccaggtgccgcacgagaaggccactgcacgg
gcgcccaaacaatttgtcgacctgcaaaacgacgtcaccgccgccgccatcgaactggcg
acccgcgagggcttcgagtcggtggaacacgtcaagcgctacaccgcgctgggcttcggc
accgaccaaggcaagctgggcaacgtcaacggcctggccattgctgcgcgttcgctgaac
gtgaccatcccgcagatgggcaccaccatgttccgccccaactacacgccggtgactttc
ggcgccgtggcgggccggcactgtgggcatatcttcgagccggtgcgctacaccgcgctg
caagcctggcacgtcaaaaacggcgccgagttcgaggatgtcggccagtggaaacgcccg
tggtacttcccgcgcaacggtgaagacctgcacgccgcagtcaagcgcgaatgcctggcc
gtgcgcgacagcgtcggcctgctggatgcctcgaccctgggcaagatcgatatccagggc
ccggatgcccgtgagttccttaaccgcatttacagcaatgcctggaccaagctcgacgtg
ggcaaggcgcgctacggcctgatgtgcaaggaagacggcatggtcttcgacgatggcgtg
accgcgtgcctggcggacaatcacttcctgatgaccaccaccaccggcggcgccgcccgt
gtgctgcagtggctggaaatctaccagcagaccgaatggccggacctgaaggtgtacttc
acttcggtcaccgaccactgggcgaccatgaccctgtccggccccaacagccgcaagctg
ttgagcgaagtcaccgacatcgacctggacaaggacggcttcccgttcatgacctggaaa
gaaggcctggtgggcggcgtgccggcgcgggtgttccgtatctcgtttaccggtgagctg
tcgtacgaagtcaacgtgcaggccgactacgccatgggcgtgctggaacagatcgtcgag
gccggcaagcaatacaacctgaccccgtacggcaccgagaccatgcacgtactgcgggcc
gagaagggcttcatcatcgtcggccaggataccgacggctcgatgactccggatgacctg
aacatgggctggtgcgtaggccgtaccaaaccgttttcgtggatcggctggcgtgggatg
aaccgcgaagattgcgtgcgtgaagaacgtaagcaactggtgggcttgaagccgattgat
ccgaaggtgtggctgccggaaggcgcgcaactggtgtttgatccgaagcagacgattccg
atgaagatggtcggtcacgtcacctccagctatgcgcacaactccctggggtattcgttt
gcgatggcggtggtcaagggtggcttgaagcgtatgggcgagcgggtgttttcaccgcag
gcggatggcagcgtgatcgaggccgagattgtgtcttcggtgttcttcgaccctaaaggc
gaccggcagaacatctga
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