Pangasianodon hypophthalmus (striped catfish): 113524086
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Entry
113524086 CDS
T05759
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04020
Calcium signaling pathway
phyp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113524086
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113524086
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113524086
Ion channels [BR:
phyp04040
]
Ligand-gated channels
Glutamate (ionotropic)
113524086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
113524086
NCBI-ProteinID:
XP_026766014
LinkDB
All DBs
Position
Unknown
AA seq
1564 aa
AA seq
DB search
MRARLDVHKVSHSSSIMLVYGRCCLSPPPLGQWACHISLTPPLPSFPRPFLFSLHTFLLL
LLLLLVSSPGCQSRRDRGSGGVTNYIPGAWPDPGLEQRPWSKQWVGSKLLQGLTIAVVLV
GNSSEVTLYGTRDNKEEWRDQGNDGFVNEGVGNVEVVRMNETDPSSIIKSVCDLMTQHWL
QGVVFGDDTDQEAIAQILDFISAQTHTPILGVKGGSSMIMAAKDDNSLFFQFGPSIEQQA
SVMLNIMEEYDWYIFSIVTTYYPGYQDFVTKIRSTIENSFVGWELEEVLLLDMSVDDGDS
KIQNQMKKLQSPVILLYSTKEEANIIFEVAHSVGLTGYGYTWIVPSLVAGDADHIPPEFP
TGMISVSYDEWDYGLEARVRDAVAVIATATSAMMMDRGPHTLLKSECHGAPEKKSTGNTN
EVLRYLMNVTFEGRNLSFSEDGYQMHPKLVLILLDKNRQWDRVGKWENGSLSMKYHVWPR
FELYSGEESRHDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKIRNQTGESGM
YIKRCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHGKKVNGTWNGMVGEVVVKNAHMAVG
SLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLLVSA
IAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPRGTTSKIM
VSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGST
ERNIRNNYKEMHSYMVKFHQRNVDEALQSLKAGKLDAFIYDAAVLNYMAGRDEGCKLVTI
GSGKVFASTGYGIAIQKDSGWKRHVDLAILQLFGDGEMEELEALWLTGICHHEKNEVMSS
QLDVDNMAGVFYMLGAAMALSLITFIAEHIFYSHLRFCCMGVCSGKPGLTFTISREVYSC
IHGVEIENKSSALNSPSTTINNTHSNILRLLRTAKNMASLSGVNGSPHSALDYLRRDSSV
YDISDQRRHSECRVPYLSENSDNNAFSDYIDQVERTFGNLHRNESDLYLHRRSGSVPGPA
PSLGSGSSLDGAIFDCSALTHRNMSNFDLLQGHAPLGLPEPYRKFSFKGGTSGYIPAYDR
YGDGDNMSDISTHTITYGNLESDSRKRKQHGDSLKKRPASAKSRRELDHAHLGYRRRPHH
GHHRHHAHRSVSPPLSEHKMRGGGGSLSFLYQDKESLRDFYLDQFRPKEGVPQWEHVDLT
DGPSGGGAGGGANCTSLVPVDDFLKSKPPKVESKVGGGEWECRNCRASSAGSKRMAQHTG
GGAYGAGGSNSCVASGVGGGASRPTSATCMRCEACKRSGNLYNISEDSNHVIDQISGRGQ
TPSQRRRAFSARPLRRQHSYDAFMDLHRDDEGLSLRSGGGAMDDVGGGFLPPRSVSLKEK
DRCMEGSFSHLFDTQQFYSPAHHSLSAFRGERDPYFLSKSLYPDHTNHNPFVPTFGDDQC
LLHGAKTYYTKKQQRADPRNPSGISSFLPSSRFTNQHSALGPPRPFNGTNGHVYEKLSSI
ESDV
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgcggctggacgtacacaaggtctctcactcctcctccatcatgcttgtttat
ggtcgctgctgtttgtccccgccccctctgggacagtgggcgtgtcacatatcactaacc
ccacctttacccagttttccccgcccttttttattttcgcttcatactttcctactactt
cttctccttctgctggtttcgtctcctggctgtcaatcacgacgggaccgagggtccggg
ggcgtgaccaattacatcccaggggcgtggcctgacccgggtctcgagcagcggccgtgg
tccaagcagtgggtggggtcgaagctgctgcagggcctcaccatcgctgtggtcctggtg
ggaaactcgagcgaagtgactctttatggaacaagggataacaaagaggagtggcgggat
caagggaacgatgggtttgtgaacgaaggggtagggaacgttgaagtggtgcggatgaac
gagacggacccaagcagcattatcaaaagcgtgtgtgatctcatgactcagcactggctt
cagggagttgtgttcggcgacgacacggaccaggaggccatcgcccaaatcctcgacttc
atctccgcacaaacacacacacccatcctcggagtgaagggaggatcgtccatgatcatg
gcagctaaggatgataactccctgtttttccagtttggtccatctattgagcagcaggcc
tcagtgatgttgaacattatggaggaatatgattggtacattttctccatcgtcaccacc
tactaccccggataccaggactttgtcaccaagatccgcagcactatagagaacagtttt
gtgggctgggaactggaggaggttttactgttggacatgtccgtggacgatggagactct
aaaatccagaaccagatgaagaagctccagagtcccgtcatcctgctctactccaccaaa
gaggaagccaacatcatcttcgaggtggcacactctgtcgggctcacaggatatggatac
acctggattgtaccatctctggtggcgggggacgctgaccacattcctccagagttccct
acaggtatgatcagtgtgtcgtatgatgagtgggattatgggttggaggcacgtgtgcgc
gatgctgtggctgttattgccacggcaacgtcagccatgatgatggatcgtggacctcac
acacttctgaagtctgagtgtcatggagccccagaaaagaagagcacaggaaacactaac
gaagtgctcaggtatttgatgaacgtaacgtttgaaggtcgtaatctgtcgttcagtgag
gacggatatcaaatgcatcccaaactcgtcctcatcctactggacaagaacaggcagtgg
gacagagtggggaagtgggagaatggctctctgtcaatgaagtatcatgtgtggccacgg
ttcgagctgtactcgggggaggagagtcgccatgacgaccacctgtcaatcgtgactctg
gaggaggcgccgttcgtcattgtggaggatgtcgaccctctgagtggaacctgcatgagg
aacactgtaccctgcaggaaacagctgaaaatacgtaatcagacaggtgaatctggcatg
tatataaaacgctgctgtaaagggttctgcatcgacatcctgaagaagatcgccaagtct
gtaaagttcacctacgacctttacctcgtcactaatggcaagcatggcaagaaggtcaat
ggaacctggaacggcatggtgggagaggtggtggtgaaaaacgctcacatggctgttggt
tctctcactataaatgaggaaaggtcggaggtcatcgacttctctgtgcctttcattgag
actggaatcagtgtcatggtctcccgtagcaacggcactgtgtcaccatcggcattcctg
gagcccttcagtgcagacgtgtgggtgatgatgttcgtcatgctgctgctggtttctgcc
atcgctgtgtttgtgtttgagtatttcagtcctgtgggctacaaccgctgccttgccgac
ggaagagagcctggtggtccttcattcactattggaaaggcgatctggctgctgtggggt
ttggtgtttaacaactcggttcctgtgcagaaccccagaggaactaccagtaagatcatg
gtgtccgtgtgggctttctttgctgtgatcttcctggccagctacactgccaacctcgca
gctttcatgatccaggaggagtacgtcgaccaggtctcaggcctcagtgacaaaaagttc
cagagacctaatgacttctctcctccgtttcggtttgggactgtgccaaacggcagtaca
gagcggaatatccgtaacaactataaggagatgcactcgtacatggtgaaattccaccag
cgcaatgtggatgaagctctgcagagcctgaaagccgggaagctggacgcgtttatatac
gacgctgccgtgctgaactacatggcgggtcgtgacgaaggctgcaagctggtgacgatc
ggctccgggaaagtgttcgcttcgaccggatacggcatcgccatccagaaagactcgggc
tggaagagacacgtggacctggccatcctgcagctgttcggagacggagagatggaggag
ctcgaggcgctctggctcacagggatctgtcaccacgagaagaacgaggtgatgagcagt
cagctggacgtggataacatggcaggtgtgttctacatgctgggggcggccatggccctg
tcgctaatcaccttcattgccgagcacatcttctactcacacctgcgcttctgctgcatg
ggagtgtgttctggaaaacccggcctcaccttcaccatcagcagggaagtgtacagctgc
atccacggtgttgagattgaaaacaagagttcagctctgaattctccttcaaccaccata
aacaacacgcactccaacatcctgcgtctgctgcgcacagctaaaaacatggcatccttg
tccggggtgaacggctccccccacagcgcactcgactacctacgccgcgactcgtccgtc
tatgacatcagcgatcagcggcgtcactcggagtgccgggtgccgtacctgtccgagaac
agtgacaataatgcatttagtgactacatcgatcaggtcgagcgcaccttcggaaacctg
caccgcaacgagagtgacctatacctgcaccgacgctcgggctctgtccctggccccgcc
cccagcctgggttctggcagctcattggatggtgccatttttgactgctccgccctcaca
cacaggaacatgagcaactttgacctgctgcagggacatgcgccacttggactgccagag
ccatacaggaagttctcctttaaaggtgggacttcaggctacatccctgcctatgatcgc
tatggcgatggagacaacatgtctgacatttccactcacaccataacctacggtaacctg
gagagcgacagcagaaagagaaagcagcatggtgacagtctgaagaagcggcctgcttcg
gccaaatcgcgccgagaactggaccacgcccaccttggttaccgacggagaccgcaccat
gggcatcaccgtcaccatgcacaccgctctgtatctccgcctctgtcagaacacaaaatg
agaggaggaggtggatctttgtccttcctgtaccaggacaaagaaagccttcgagacttt
tatctggaccagttccgtcccaaagagggcgtgccccaatgggagcatgtggatttgact
gatgggccaagtgggggtggggctggaggtggggctaattgcactagcctggtgcctgta
gatgacttcctgaaaagcaaaccaccaaaggtggagtctaaagtgggaggaggggaatgg
gagtgtcgaaattgccgtgcgagcagtgcaggaagtaaacgaatggcacagcacacaggg
ggcggggcttatggagctggtggaagcaatagctgtgtggcatcaggagttgggggcggg
gccagccgtcccacttcagccacatgcatgcgttgcgaagcttgtaagcgttcaggcaac
ttgtacaacatcagcgaggatagcaatcatgtaattgatcagataagtgggcggggtcaa
acaccatcacagcggcgaagagcatttagcgcgagacctttacgcaggcagcattcgtat
gatgccttcatggacctgcacagggatgacgaagggctaagtttgcggtcagggggaggg
gctatggatgatgtaggtgggggttttctgcctcctcgcagtgtgagtttgaaggagaag
gatcgctgtatggagggctcattctcccatttatttgacacccagcagttttatagcccc
gcccaccactccctgagtgcattccgtggggaaagagacccttacttcctgtcaaaatca
ctctaccctgatcacaccaatcacaatccattcgtgccgacattcggagacgatcagtgc
ttgctgcacggcgctaaaacgtactatacgaaaaagcagcagcgtgctgatccgagaaat
ccttccgggatttcatcattccttccctcatctcgattcaccaatcagcactcggctctc
gggccgccgcgacctttcaacggcaccaacggccatgtgtacgaaaaactctccagcatc
gagtcggatgtgtag
DBGET
integrated database retrieval system
