Pangasianodon hypophthalmus (striped catfish): 113524323
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Entry
113524323 CDS
T05759
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00310
Lysine degradation
phyp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
113524323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113524323
03036 Chromosome and associated proteins [BR:
phyp03036
]
113524323
Enzymes [BR:
phyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
113524323
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
113524323
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
113524323
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
113524323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
PRDM2_PR
zf-C2H2_4
SET
zf-C2H2_6
Zn-ribbon_8
zf_UBZ
zf-C2H2_jaz
Zn_ribbon_SprT
zf-C2H2_3rep
zf_PR_Knuckle
Motif
Other DBs
NCBI-GeneID:
113524323
NCBI-ProteinID:
XP_026766326
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MSSAGGRQRSSRESQAPDPAPAPSQDVKTETSDGGTEVCVKKEETLEQNISNRGNNRRNR
PDVISIKEEEADHEDNLYCEVCKSFFYNKCEVHGPALFITDTPVPMGVPDRARQTLPPGL
EIRKSGIPDAGLGVFNKGETVPVGAHFGPYQGELVDREEAMNSGYCWVIYRSGQCEEYID
AKREMHANWMRYVNCARNDEEQNLVAFKYRGGIMYRCCRPINPGQELLVWYDEEYAKDLG
RTYDYRRNKKCHANELNNGLLQVFSCSLCPLSYTSQTDLSKHVQSFHYEEYERQQKSGEI
KKEIQVPTNGSSDQQTSSSTLSSNTSQKEMQKKIHHCSECGKSFDNQSALKAHQCSHTGE
RPYCCSHCGKSFNHKSVLRKHQRIHTGEKPYRCSQCGKSFIQKSDLQQHQRIHTGEKPYN
CSQCGKCFNHHSHLQLHQRIHTGEKPFQCSQCGKSFTQKSNLQVHQRVHTGEKPFHCSEC
GKSFTLQSNLQLHQRIHTGEKPHQCAQCGKSFTHQSTFQRHQRIHTGEKPYYCSQCGKCF
NHQSHLQRHQRIHTGEKPYHCSQCGKSFSQQSSLHVHQRIHTGEKPYHCSRCGKSFTYSL
TFKTHKCTNTDPLHYLNYLSN
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagcaggaggcagacagcgctcctccagagagtctcaggctcctgatcctgct
cctgctccctcacaggatgtgaaaacggagacttcagatggagggacagaggtctgtgtg
aagaaagaggagacgctggagcagaacatctccaaccgtggaaacaatcgcagaaacaga
cccgacgttatctccattaaagaggaagaagctgatcatgaagacaatctctactgtgag
gtttgcaaatctttcttctataacaagtgtgaggttcatggtccggcactcttcatcact
gatacccctgttcccatgggagtccctgaccgagccagacaaactcttcctcctggatta
gagattcggaagtccggtattcctgatgcaggcctgggagtgtttaataagggggagact
gttcccgttggtgcacacttcggaccctaccagggagagctggtagacagagaggaagct
atgaacagtggctactgttgggtgatatacagaagtgggcagtgtgaagaatacatagat
gccaagagagaaatgcatgctaactggatgaggtatgtgaattgtgctcgtaatgatgaa
gagcagaatcttgtggcatttaagtatcggggtgggattatgtaccgttgctgtcgaccc
atcaacccaggacaggagctcttggtgtggtatgatgaggagtatgccaaagatctcggg
cgtacatatgactaccgcaggaacaaaaagtgccacgcaaatgaattaaacaatggcctg
ttgcaagtcttctcctgctccttgtgtccactttcctatacgtctcaaactgatctcagc
aaacacgtccagagcttccactacgaggagtatgagagacagcaaaaatcaggagagatt
aaaaaggaaattcaggtgcccacaaatggctccagtgatcagcaaacttcatctagtact
cttagttctaacacttctcagaaagaaatgcagaagaaaattcaccactgctcagagtgt
ggaaagagttttgataatcagagtgctctcaaagcacatcagtgcagtcacactggagag
aggccgtattgctgctcgcattgtggtaagagttttaatcataagagtgttctccgaaaa
catcagcgcattcacacaggagagaagccgtatcgctgctcacagtgtggtaagagtttt
attcaaaagagtgatctccaacagcaccagcgcattcacacaggagagaagccgtataac
tgctcacagtgtgggaagtgttttaatcatcatagtcatctccaactacaccaacgcatt
cacacaggagagaagccgtttcagtgctcacagtgtggaaagagtttcactcaaaagagt
aacctccaagtgcatcagcgtgttcacacaggagagaaaccgtttcactgctcagagtgt
gggaagagttttacccttcaaagtaatctccaactacaccagcgcattcacaccggagag
aagccgcatcaatgcgcacaatgtgggaagagttttacccatcagagtactttccaacga
caccagcgcattcacacaggagagaaaccatattactgctcacagtgtgggaagtgtttt
aatcatcagagtcatctccaacgacatcagcgcattcatacaggagagaagccgtatcac
tgctcacagtgtggaaagagtttctctcagcagagtagtcttcatgtccaccagcgtatt
cacacaggagagaagccgtatcactgctcccggtgtgggaagagttttacttattcactt
acattcaagacacacaagtgcactaacacagacccattgcattatttaaattatttgtca
aattaa
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