Pangasianodon hypophthalmus (striped catfish): 113529834
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Entry
113529834 CDS
T05759
Symbol
polg
Name
(RefSeq) DNA polymerase subunit gamma-1
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113529834 (polg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phyp03032
]
113529834 (polg)
03029 Mitochondrial biogenesis [BR:
phyp03029
]
113529834 (polg)
Enzymes [BR:
phyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
113529834 (polg)
DNA replication proteins [BR:
phyp03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
113529834 (polg)
Mitochondrial biogenesis [BR:
phyp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
113529834 (polg)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
113529834
NCBI-ProteinID:
XP_026775150
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MLRLVSPRRRWRCPSAALRRRRCSAAGEPKVQEHSTHTPKNPLNIQMLSRNLHEQIFRSS
AAEYSSQDIERSIRHLEKHKLWGKEASLLSDVELKLPDMYGKNIDDHFRKLAQKQSLPYL
KAAGQLQQAQLPDMPPQWAWEVGWVKYWPNGEHTKVDFPEENALVFDVEVCMDEGHCPTL
AVAVSPTAWYSWCSKRLIEERYSWSSQLTLADLIPLETAANSSRPPGGHWQERLIVGHNV
SFDRAHIKEQYLLKGSKMRFLDTMSLHMAISGLTGFQRSLWMASRYGKRKGLHEVKQHMK
KLGRRPEGPAIGSWDWVNISSINNLADVHALYVGGDPLEKEARNIFVKGSMSDIRSNFQE
LMQYCAMDVLATHEVFVQQLSLFLERCPHPVTFAGMLEMGVCYLPVNQSWDRYLEDAQDT
FEELQREMKKSLMILADDACQLLQDDRYKEDPWLWDLEWDVQEFKQKKMTVSKRKKAKQE
AEKAAVASASGNLEKNWDEDPGPPEEEEEMKDPSRELVEQLKSTVSFLPKRRQHMPAHPG
WYRKLCVRMSEEEDWSPGATLISLQMRVTPKLMGLTWDGFPLHYTEKHGWGYLVPGRRDN
LETTDDTEGPICPYRAIENIYKEYCEQKGKEQPQCLDSLPSDDLMLTDSSVWQTVEELSR
LEVVSEDETLPRAVRAKRSKSMDSAHECPYHHGNGPYNDVNIPGCWFFKLPHKDGNENNV
GSPFSKDFLSKMEDGTLQAGRGGTNAARALEINKMISFWRNAQKRISSQMVVWLRRGELP
RAVIRHDDYSEEGQYGAILPQVITAGTVTRRAVEPTWLTASNARRDRVGSELKAMVQVPP
GYHLVGSDVDSQELWIAAVLGESHFAGMHGCTAFGWMTLQGKKSQGTDLHSRTADAVGIS
REHAKVFNYGRIYGAGRPFAERLLMQFNHRLSQTEAARKARQMYALTKGLRRYHLSEEGE
WLIKELGVNVERDEDGTVSREELRRISKLLGQKSRNKKKWDIVGRRVWTGGTESEMFNKL
ENIAHSKQPATPVLGCRISRALEPAAVKEEFITSRVNWVVQSSAVDYLHLMLVSMKWLME
EYDIDGRFCISIHDEVRYLVKSEDRYRAALALQITNLLTRCMFAYKLGMNDLPQSVAFFS
AVDIDQCLRKEVIMDCVTPSNPTGLERRFGLAQGEALDIYQIIEITKGSLAKGR
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgctccgtctggtgtctcctcggaggaggtggcgatgcccttcagctgctctgcggagg
agaaggtgctcagctgcaggtgaacccaaagtgcaggagcactccactcacacccctaag
aaccccctcaacatccagatgctctccaggaacctgcacgaacagatttttcgctcctca
gcagcagagtactcaagtcaggacatagagcgaagcatcagacatttggagaagcataaa
ctctggggaaaggaggcatcactgttgagtgatgtggaactgaagctaccagatatgtat
ggcaaaaacattgatgaccactttcgtaaacttgcacaaaagcaaagcctgccttatttg
aaggcagccgggcagctccagcaagcacagctgcccgacatgccccctcagtgggcttgg
gaagtgggctgggtgaagtactggccgaatggagagcacacgaaggtagattttccggaa
gagaatgctctggtgtttgacgtggaagtctgcatggacgagggccactgtcccacgctg
gcggtggccgtttctccaactgcttggtactcgtggtgtagtaaaagactgattgaggag
agatacagctggtccagtcagctgacgctagcagacctaattcctctggagactgcagcc
aactccagcaggcctccaggtggacactggcaggagagactcatagtggggcacaatgtc
agctttgaccgagcgcacattaaagagcagtacctcttaaagggctccaagatgcgtttc
ctggatacgatgagcctccacatggctatctcaggactgacaggttttcagcgatccctc
tggatggccagcaggtatggcaagagaaaaggactgcatgaagtcaagcagcacatgaag
aagcttggacgccgccctgaaggcccagcgatcggttcttgggactgggtcaacataagc
agtataaataacctagctgatgtccatgctctctatgttggaggagatcctctggaaaaa
gaggccaggaatatttttgtgaagggcagcatgagtgacattaggagcaatttccaggag
ctgatgcagtattgtgctatggatgtgctggctactcatgaggtgtttgtccaacaatta
tccctcttcttggaaaggtgtcctcatccagtgacctttgcagggatgctggagatgggt
gtttgctacttgcctgtcaatcagagctgggaccggtatttggaggatgcccaggacaca
tttgaggagcttcaaagagagatgaaaaaatctctgatgattcttgcagatgacgcctgt
cagttacttcaggacgacaggtacaaggaggacccttggctttgggacttagagtgggat
gttcaggagtttaaacagaagaaaatgaccgtgagcaagagaaagaaggcaaagcaggag
gctgaaaaagcagcagtggcatctgcatctggcaacctggagaaaaactgggatgaggat
ccaggccctccagaggaagaggaagagatgaaggaccccagcagagaacttgtggagcag
ctaaagagtacagttagcttcctgcctaagaggaggcagcacatgcctgcacacccaggc
tggtaccggaagctgtgtgtgaggatgtcggaagaggaggactggtctcctggagccact
ctgatcagcctgcagatgagagtgacacccaagctgatgggcctgacgtgggatggtttt
cctctgcattacacagagaaacatggctggggctaccttgtcccaggacgcagagacaac
ttggagaccacagacgacactgaaggacctatatgtccctacagggcaattgagaacatc
tacaaagaatattgtgaacagaaagggaaggaacagccacagtgtctggacagtctgccc
tcagatgaccttatgctgactgacagcagtgtgtggcaaacagtggaggagttgagtcgg
ctagaggtcgtgtctgaagatgagacattgccacgggcagtgagagccaaaaggtctaag
agtatggactcggctcacgagtgtccctatcaccatggaaatggaccatacaatgatgtc
aacatccctggatgttggttcttcaagctacctcataaggatgggaatgagaataacgtg
ggcagccccttctctaaagactttctgtctaaaatggaggatggaacccttcaggcaggc
agaggaggaaccaatgcagcacgtgcactggagatcaacaaaatgatctcattttggaga
aacgcccaaaaacgcatcagttctcagatggtcgtttggctacggaggggagaacttcct
cgtgctgttatcagacatgatgactacagtgaggaggggcaatatggtgccattttacca
caggttattactgctgggacagttacccgcagggctgtggagccgacgtggcttactgcc
agtaatgcacggcgggatcgtgtaggcagtgaactgaaagctatggtgcaggtgcctcct
ggttatcacctggtgggttcagatgttgactcacaagaattgtggattgcagctgtgcta
ggagagtctcactttgctggcatgcacgggtgcacagcgtttgggtggatgaccttgcag
gggaaaaagagtcagggcacagacctgcacagccgcactgcagatgctgtgggcatcagc
cgggagcatgctaaagtcttcaactatggccgcatctacggtgctggccggccgtttgcc
gagcgcctactcatgcagttcaaccatcgactaagccaaaccgaggcagctaggaaagca
cgccagatgtatgctctcactaaaggactgcgcagatatcatctctcagaagagggggaa
tggctaattaaggaactaggtgtaaatgtggagagggatgaagatgggactgtgtccaga
gaggagttacgccggatttcaaaactattgggccagaaatctcggaataagaagaagtgg
gatatagttggacggcgtgtgtggactggaggtactgaatccgagatgttcaacaagctg
gaaaacatcgctcactcaaagcagccagccacccctgtgctaggctgcagaatctcccga
gccctggagccagctgctgtcaaagaagagttcattaccagcagggtgaactgggtggtg
cagagttcagcagtggactaccttcacctgatgctggtgtccatgaagtggttgatggaa
gagtatgacatagatgggcgcttctgtatcagcattcatgatgaagtgcgctacctagta
aagagtgaggaccgctacagagcagcactcgcactacagatcaccaacctacttacccga
tgtatgtttgcctataagctgggcatgaatgatctccctcagtctgtggctttcttcagt
gctgtagatattgaccagtgcttacggaaagaggtcattatggactgtgtaactccatct
aatcctactggactggagcgccgatttggactagcacaaggtgaagccttggatatctat
cagatcattgagattactaaagggtctttggccaaaggaagatag
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