Pangasianodon hypophthalmus (striped catfish): 113532729
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Entry
113532729 CDS
T05759
Symbol
slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113532729 (slc6a4)
Transporters [BR:
phyp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
113532729 (slc6a4)
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Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
113532729
NCBI-ProteinID:
XP_026780078
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All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MEMKQAVMINREDQDEKDKSEENDRLVDGSIAEKGQKLVSGPTQVSNGYPSTSAQSPREG
TGAVGDRTSASGGFRTLVVQQTSLDPPRETWSKKVDFLLSVIGYAVDLGNVWRFPYICYQ
NGGGAFLLPYLLMAVFGGVPLFYMELALGQFHRSGCISIWKHICPIFKGIGFAICIIALY
IAFYYNTIMAWALYYLLSSFNSTLPWSTCKNPWNTANCKQYLSTDSNISWTNESISPAEE
FYTRKVLQVHLSPGLHQLGAVSWQLALCLLFIFSIVYFSIWKGVKTSGKVVWVTATLPYV
VLLILLVRGATLPGAWRGVVFYLKPNWEKLLSTTVWIDAAAQIFFSLGPGFGVLLAFASY
NPFHNNCYKDALVTSSVNCLTSFMSGFVIFTVLGYMAEMRKEGVETVAKDAGPSLLFIVY
AEAITNMPASTFLAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPHLLARRREWFVLGLV
CVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTTRFCNDVQLMLG
FSPGLFWRVCWVAICPCFLLFIIGSFLAFPPVVRLFDYLYPFWTTVLGYCIGVSSFICVP
SYMVYHLLTTKGTFKQRLMKGITPEPANIEGLHRDVIITNAV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacaggcagtgatgattaaccgagaggaccaagatgagaaggacaaatct
gaagagaatgacaggctggtggatggcagcattgctgagaaagggcagaaactagtctca
gggcccacacaggtgtcaaacgggtaccccagcacgtcggctcagagcccgagggaaggc
accggggctgtaggggacaggacaagtgcttctgggggattcaggacgcttgtggtccag
cagaccagtctggatccacccagggagacatggagcaagaaggtggatttcctcctgtcg
gtcatcggctacgcagtggacctgggcaacgtgtggcgcttcccatacatctgctaccag
aacggaggcggtgcgttcctgttgccctacctgctgatggcagtgtttggcggggttccc
ctgttctacatggagctggcactcgggcagttccaccgcagtggctgtatatccatctgg
aaacacatttgccccatcttcaaggggattggctttgccatctgcattattgccctgtac
attgccttctactacaacaccatcatggcctgggctctgtattacctgttgtcctccttc
aactctacgcttccatggtcgacatgcaaaaacccctggaacacggccaactgcaagcag
tacctctccaccgacagcaacatctcctggaccaatgaatccatctcgcctgccgaggag
ttctatacacggaaggtgttgcaggtgcacctgtccccaggtcttcatcagctgggtgca
gtgagctggcagctggccctctgtctgctcttcatcttcagcatcgtctacttcagcatc
tggaagggggttaagacctctggcaaggtagtatgggtgacagcaactcttccatatgtg
gttctgttgatccttctggtgcgaggtgccactctgccgggagcatggagaggtgttgtc
ttctacctgaagcctaactgggagaagctcctgagcactacggtttggattgatgcagca
gcccagatcttcttctctctgggtccaggttttggtgtgctcctggcctttgccagctac
aatccctttcacaacaactgttacaaagatgcgttggtgacgagctcagtgaactgtctg
accagcttcatgtcaggctttgtgatcttcaccgtactgggctacatggctgagatgcgg
aaggagggggtggagacagtagcaaaggatgctggtcccagtctacttttcatcgtctat
gctgaggccatcaccaacatgcctgctagcactttccttgccattatcttcttcctcatg
atcatcatgctgggattagatagcacgtttgctgggctggaaggagtgatcaccgccatg
ttggatgagtttccccacctgttggcccgcaggagagagtggtttgtgctaggtctggtg
tgtgtctgctacctgggagctctgtccacacttacctatggaggggcgtttgtggtgaaa
ctgtttgaagaatatgcaacaggccctgccgtcatcactgtagtcttccttgaagtcatt
gctgtttcctggttttatgggacaacacggttctgcaatgatgtgcagctgatgcttggc
ttctccccgggtctgttctggagggtgtgttgggtggccatctgcccctgcttcctactg
ttcatcattggaagtttcctggccttccctcctgtggtgaggctgtttgactacctgtac
ccattctggaccactgtactgggctactgcattggtgtctcctctttcatttgcgtgcct
tcctacatggtctaccacctgctcaccaccaaagggaccttcaaacagcgtctgatgaag
ggcatcacccctgagcctgcaaacattgaaggcctgcacagagatgtcatcatcaccaac
gctgtgtga
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