Pangasianodon hypophthalmus (striped catfish): 113533956
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Entry
113533956 CDS
T05759
Symbol
ctnnb1
Name
(RefSeq) catenin beta-1 isoform X1
KO
K02105
catenin beta 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04310
Wnt signaling pathway
phyp04510
Focal adhesion
phyp04520
Adherens junction
phyp04916
Melanogenesis
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113533956 (ctnnb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113533956 (ctnnb1)
04520 Adherens junction
113533956 (ctnnb1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
113533956 (ctnnb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113533956 (ctnnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
Cnd1
HEAT_2
Adaptin_N
ARMC9_ARM
Atx10homo_assoc
Queuosine_synth
Motif
Other DBs
NCBI-GeneID:
113533956
NCBI-ProteinID:
XP_026782272
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MATQSDLMELDMAMEPDRKAAVSNWQQQSYLDSGIHSGATTTAPSLSGKGNPDDEDVDNQ
VLYEWEQGFNQNFSQDQVADIDGQYAMTRAQRVRAAMFPETLDEGMQIPSTQFDSATPTN
VQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKK
EASRHAIMRSPQMVSAIVRTMQNTSDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALV
KMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCL
QILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAG
GMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQTSLAEVDVMQEGMEGLLGTLVQLLGS
DDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHL
TSRHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQG
AIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDIHNRIVIR
GLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV
ATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMTWNETGDLGLDIGAQGEPLGYRP
DDPSYRSYHPGGYGQDAMGMDPMMEHDMGGHHPGTDYPVDGLPDLGHTQDLMDGLPPGDS
NQLAWFDTDL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccagtctgatctgatggagcttgacatggcaatggagccagaccgtaaagct
gccgttagtaactggcagcagcagtcctacctggactcaggtatccactctggagcaacc
accactgctccctccctcagtggtaagggcaatccagatgatgaggatgtggacaaccag
gtgctgtatgaatgggagcaaggattcaaccagaacttcagccaagaccaagtggcagac
attgatggccagtatgccatgaccagagcccagagagtgagggcagccatgtttccagaa
acactcgatgagggcatgcagattccttccacacagtttgacagtgcaaccccgaccaac
gtgcagcgcctggctgaaccctcacagatgcttaagcatgctgtggtcaatctcatcaac
tatcaggatgatgcagaactggctacacgtgccatcccagaactcacaaagctactaaac
gatgaggatcaggttgtggtaaataaggcagcagtcatggtgcatcagctctccaagaaa
gaggcttcacgccatgccatcatgcgctctcctcagatggtgtcagccatcgtgaggacc
atgcagaacaccagtgatgtggagacagcccgatgcacagctggcacccttcacaatctc
tcccaccatagagaggggctgcttgctatcttcaaatcagggggcatcccagctctcgtc
aaaatgctgggctctccagtggactctgtactgttctatgccatcacaactctccacaac
ctgctgctgcaccaggagggagccaaaatggctgtgcgtctggctggaggcttacagaag
atggtggcgttgttgaacaaaaccaatgtaaaattccttgccatcacaacagactgcctt
cagatcctggcttatggcaatcaagaaagcaagctcatcatcctggccagcggaggcccc
caggctttggtcaacatcatgaggacatatacatatgagaagctgctgtggaccactagc
cgtgtgcttaaagtgctgtctgtatgttccagtaacaaacctgctattgttgaggctggt
ggtatgcaggcactgggtctccaccttacagatcccagccagcgtctggttcagaactgt
ctatggactctcaggaacctgtcagatgctgccaccaaacagacctccttagctgaagta
gatgtgatgcaggagggcatggagggcctgttgggcactctggttcagcttttaggttct
gatgacatcaatgtggtgacctgtgctgctggcatactgtccaacctcacctgtaacaac
tacaagaacaaaatgatggtgtgccaggtgggtggcatcgaggcactcgtgcgtacagtc
ctgcgtgctggagaccgggaggatattactgagcctgctatctgtgcccttcgccacctc
acctccagacaccaggatgcagaaatggcccagaatgcagtacggctacactatggcctg
ccagtggtggttaaacttctccaccccccttcacattggcctcttataaaggctacggtt
ggtctgatccgtaatctggctctgtgccctgccaaccatgcacctcttagagaacaaggt
gccatccctcgattggtccagctgcttgtcagagcccaccaagacactcagagacgtact
tcgatgggaggtacacagcaacagtttgtggagggagttcgtatggaggagattgtagag
ggctgcaccggagcactgcacattcttgcaagagatattcataacaggatcgtcatcaga
ggactcaacaccattccactctttgtccagctgctgtactcccccattgagaacatccag
cgtgtagctgctggggtcctgtgtgagttagcccaggataaggaggcggctgaggccatt
gaagcagagggagcaactgcaccactcacagagctgcttcactcccgaaatgaaggcgtt
gccacatatgctgcagcagtgctgttccgcatgtcagaggataaaccccaggactataag
aagagactgtctgtggagctcaccagctccctgttcaggactgagcccatgacctggaac
gagactggagacctgggtctggatatcggagcacaaggagagcctcttggctacagaccg
gatgaccccagctaccgctcctaccaccctggagggtatgggcaagatgccatgggcatg
gaccccatgatggagcatgatatgggtgggcaccatcctggcacagactaccctgtggat
ggcctgcctgaccttgggcacacccaggacctgatggatggccttcccccaggcgatagc
aatcagctcgcttggtttgatactgatctgtaa
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