Pangasianodon hypophthalmus (striped catfish): 113534820
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Entry
113534820 CDS
T05759
Name
(RefSeq) PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00310
Lysine degradation
phyp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
113534820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113534820
03036 Chromosome and associated proteins [BR:
phyp03036
]
113534820
Enzymes [BR:
phyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
113534820
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
113534820
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
113534820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2HE
zf-C2H2_jaz
YjdM_Zn_Ribbon
Motif
Other DBs
NCBI-GeneID:
113534820
NCBI-ProteinID:
XP_026783592
LinkDB
All DBs
Position
Unknown
AA seq
1548 aa
AA seq
DB search
MGDSENVKAEEQQQYVILHCPTDSHQHSLTGESPPLRDSLKEKESEAEGGTDDMMEQSEE
DQNILPAQRTGRPAMEPVPLQTTDVINQNIPCKTSETELLEMLKQDNKSDSPSCEADADL
DPDYDPKINPDGNHQGSCMFFCQHCQRRFTTKQGLERHMHALSSCHTQIFKCRYCRKCFS
TQFCRRRHERRHSNTNRRTGGLIISPAPQVVGETQGMVSSQEEDQLTLTSQPVSNSLVPD
LEGRGDSDEFGETKCSFACKYCKKAFGTHTSLRRHERRIHERRLLPRAVRQKVVNSHEVQ
VQHSSGAPEASSSTQHSDEVRQEEEYMVDISSNISENLSFYIDGKIISTSAVTNCEVMEL
NSAAAVIGLDAFIVNQAQITQALKIESNDCSMTSDLCGQSSGRRRTSTPPLLPQIKTELE
SESILTTPSSASEGTLIGTVFPRTLETIVLQKEKTIYLSPKLKQLLQNQDSSKPSFSQIS
EGQKLCPPLSLTLLPATSSRFKRRTTSPPKSPQQSSTSVLKSTIVQEIDSSAPKVPKIDS
HCTSTVMSLSKKQEMETVNPATNSTETTQEVLPLDCSASGTGGRSCNQQPLDLSSAVGKR
DSEVLADCILDLSMSRNRIESDSTGCLAFQTSVRRTKPNSSMLEKVLLSQYAAVDVPTPA
DGILNGPLATDLATMAVSEPIPANPESVMFELPPPSPPALNATPSLPNSVALHTASPAQP
LSATSEPTEIFLPAETSITNQELHPICSTAQSSSPVVLNTPVELAVGNSLTAFNVSLPNW
LNSAPGSVTHALIPTTPSLSLQGPQFLTDASVCELAQRTLVIDSVLSPEAHLISPMLVNQ
SNISSLSFSPNVVVIEYTVALESSNTTPVPQANAGHALFDKTPPDHTEAQEPQPSSQLQT
ANIEPSVPELPEDGTVEAQDQRLDSSSTGESLENSVDAVLPSFGPSGSEKVETAVEPAEN
SSTTDDLKLETSDFSIQNNPMREEQSPLPPLCKRFMCNACDELFQSMKGLSQHIVEHSDT
WPYKCEFCVQLFESDTGLFEHRSSYHGIGKIYVCKICSKEFAFLCNLEQHHRDLHPGQEC
SHTEVENGKLRPENHNSPVRADTVTTTCPTKHKRSQSYQTAPNPEADNNSENTTEELYTT
IKIMASESVKPKVTDVRLGINQHYPSFKPPPFPYHNRTPVGPTTTTATNFTTHNIPQTFS
TTVRCTKCGRGFDNMPELHKHILACANASDKKRYTPKKNPIPLKQFAKVQNGVLLPARGV
NLRQNVSQKLGQPKKLHCHESEAKTKLSAHSKRKSMWVQRGRPVGRKSSQEELEVYVCPH
CSREFTYHASLKKHMAFSCPMKPICRKPPKRKGSIASTQENHGRIRTRVSDVIMKPQRLN
QGQKTLAKTQTHESGSASNVNLPVKAQIGKGKITVRNFRPKTSDILSSPAIHISKKSRLI
LMDAIQSPLASKSLVALGKSQQQSNGVHSMERKIKQREVELKPCTEEHLSLRVRGPITRS
LQQVTSNVTSNTNKKTNSANPAKCLVQTDDQNVTAHQAVEEIKSKDLK
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattctgagaatgtgaaagcagaggagcagcagcaatatgtaattctgcactgc
cccactgatagtcatcagcattctctgactggggaatctccccctctacgtgactcactg
aaggagaaagagagtgaggcagagggagggactgatgacatgatggagcagtctgaggag
gaccaaaacattttgccagcacagaggactggtaggccagccatggagccagtaccactg
caaaccactgatgtaataaatcaaaatataccctgtaagaccagtgagacagaactcttg
gaaatgctcaaacaggacaataaatcagactctccctcatgtgaagcagatgctgacctg
gaccctgactatgaccctaagattaaccctgatggcaaccaccagggttcatgcatgttc
ttctgtcagcactgtcaaagacggtttactaccaagcaaggcctggagcggcacatgcat
gccttgtcatcctgccacacacagatatttaaatgccgctactgccgaaagtgcttcagt
acacagttctgccgacgacggcatgagagaagacatagtaacaccaatagaaggacaggt
ggactcataattagccctgctccacaggttgtcggagagactcagggaatggtctcttca
caagaggaagaccaacttaccctgacttcccagccagtcagcaactctcttgtgcctgat
ttggaaggaagaggtgactcggatgaatttggagaaactaagtgctcttttgcctgcaag
tactgcaagaaagcatttggaactcacaccagcttgcgaaggcacgagcgcaggatacac
gagcgacgtctgttacccagagcagtccgtcagaaagttgtaaactctcatgaggttcaa
gttcagcattccagtggtgcgccagaagcgtcttccagtacacaacacagtgatgaggtc
aggcaagaagaggagtatatggtcgatatttccagcaacatctctgagaacctcagcttc
tacattgatgggaaaatcatctccaccagtgctgtcactaattgtgaagtgatggagctg
aattccgctgctgctgtgattggtctggatgcctttatcgtcaaccaagctcaaattaca
caggcccttaaaatagagtctaatgactgcagcatgacctctgacctctgtggtcagtcc
tctggcagaaggaggacatctaccccacctttattgccacaaatcaaaactgaactagag
tctgaatctatcttaacaacaccttcctctgcctcagaaggtacattgattggcactgtt
ttcccccggacattagagaccattgttttacaaaaagagaaaactatttatctgtccccc
aagctaaagcagctcctacagaaccaggacagcagtaagccatcattttctcaaatcagt
gaaggccaaaaactctgtccacctttatcactaacacttttacctgcaacaagtagcagg
tttaagagaaggacaacatcccctcctaaatctccacagcaaagcagtacatcagtgctt
aaatctaccattgtacaggaaatagattcttctgcacctaaagtgccaaagatagacagt
cactgcacatctactgtgatgagcttatctaaaaaacaagaaatggaaactgtaaatcca
gctacaaacagtactgaaaccactcaggaagttctgccattggactgctctgcatcaggg
actggcggcaggtcatgcaatcagcagccgctagatctctccagtgctgtgggtaagaga
gacagtgaggtcttagctgattgtattctggatctgagcatgagcagaaatcgtatagag
tctgactcaactggatgtttagccttccagacatcagttaggaggactaaacccaactca
agcatgttggagaaagtattgctaagccagtatgctgcagtggatgttcctacaccagca
gatggaattctcaatggtcctttagcaacagatctagcaacaatggctgtgtctgagcca
attcctgctaaccctgaaagtgttatgtttgagctgcctccaccgtctcctcctgcactg
aatgcaaccccttctctgccaaattctgttgcactgcacactgcctctccagcccagccc
ctttcagctacttcagagcccacagagatattcctaccagcggaaacatccataaccaat
caagagcttcaccctatctgctccactgctcagtcctccagtcctgtagtgctcaacact
cctgtggaactcgctgttggaaattctttgacagcttttaatgtgtctcttcccaattgg
cttaattctgcccctggaagtgtgacccatgcactcattcccacaaccccaagtctaagt
ttacaaggtcctcagtttcttacagatgcatctgtgtgtgaactagcacaaaggaccttg
gtgattgattctgtcctgtcacctgaagcacatctaatttctcccatgttggtaaaccag
tcaaacatcagttccctgagtttttctccaaatgtggttgttattgagtacactgttgct
ctggagtcgtctaataccacccctgttccccaagctaatgctggtcacgctctctttgat
aaaacaccaccagatcacactgaggcacaagaaccccagccttcctctcaactacagact
gccaacatcgagccatcagttccagaactgccagaggatggcactgttgaagctcaagat
caacgactggactcatcatctactggagaatcattagagaattcagtagatgcagtactg
ccatcatttggtcccagtggttcagaaaaagtagagacagcagtggagcctgcagaaaat
tcatccaccactgatgatctcaaactggaaacctcagacttttctatacagaacaaccct
atgcgtgaggagcaatcacccttgccacctctatgcaaacgctttatgtgtaatgcctgt
gatgagctcttccagtccatgaagggtctgagtcagcatattgttgaacactcagacact
tggccgtataagtgtgaattttgtgtgcagctgtttgagagtgacactggtttatttgag
caccgatccagttatcatggcattggtaaaatctatgtctgcaaaatatgctccaaagag
tttgcctttctttgcaacctagagcaacatcatcgagatctccatcctggtcaggagtgc
tcacacactgaagtcgaaaatggtaagttaagacctgaaaaccataatagtccagtaaga
gctgatactgttaccacaacgtgtcctacaaaacacaaacgtagccagtcctaccaaaca
gctccaaatccagaggctgacaataactctgaaaacactactgaggagttatacactacc
atcaagattatggcatctgaaagtgtcaaacccaaagttaccgatgtgcgtcttggtatt
aaccagcattacccaagttttaagccacctccatttccatatcacaaccgaacaccagtt
ggaccaaccaccaccacggccactaacttcaccactcataatatcccacagactttcagc
actacagttcgctgcaccaagtgtggcaggggctttgacaacatgcctgaactgcacaag
cacatattagcctgtgctaatgctagtgacaaaaaacgctacactccaaaaaagaacccc
attccactcaagcaatttgcaaaagtgcaaaatggagttctgttgcctgctagaggagtc
aaccttagacagaatgtttctcaaaaacttggacaaccaaaaaagctccattgccatgag
tcagaagctaagacaaagctgagtgctcatagtaagaggaaatctatgtgggtacaaaga
ggcagaccagtagggcgaaagagctcacaggaggaactggaggtttatgtttgtcctcac
tgtagcagggagttcacttaccatgccagcctgaagaaacatatggctttcagctgccca
atgaaacctatttgcaggaaacctccaaaaagaaaaggtagcattgcatcaacacaggaa
aaccatggacgtatccgcacacgtgtatcagatgtaataatgaaaccacaaaggttaaat
caaggacagaaaaccttagccaaaacgcagacccatgaatctggttcagccagcaatgtg
aatctaccagtcaaggctcaaattggcaaagggaaaattactgtgcgtaattttaggcct
aaaacatctgatattctctcaagcccagcaattcacataagtaaaaaaagtagactcatt
ctgatggatgccattcagtcaccactggcatccaagtctttagtagcactagggaaatct
cagcagcagagcaatggggtacacagtatggagaggaaaataaagcaaagagaggttgag
ttgaaaccctgcacagaggaacatttatctctgcgagtgagaggtcccattactcgcagt
ctacagcaggttacatctaatgtcacatctaatactaacaaaaagactaactcggctaat
ccagcgaaatgcttagtccagacagatgatcagaatgtcactgcacatcaggcagttgaa
gaaataaagtcaaaagacttgaagtaa
DBGET
integrated database retrieval system
