Pangasianodon hypophthalmus (striped catfish): 113535568
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Entry
113535568 CDS
T05759
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
KO
K02599
Notch 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113535568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
Ank_4
NOD
Ank_5
Ank_3
EGF_3
DL-JAG_EGF-like
Gram_pos_anchor
Motif
Other DBs
NCBI-GeneID:
113535568
NCBI-ProteinID:
XP_026784785
LinkDB
All DBs
Position
Unknown
AA seq
2419 aa
AA seq
DB search
MNRFFLIPLFLGTAVLCEGKGLRCLEPCQNGGTCELTANGKPGCSCPVDYAGAQCQFPNP
CSPSPCRNGGVCRPRTQGNDVEFTCDCTLGFSGPLCLTPVNHACMSSPCRNGGSCSLLTL
STYSCRCPPGWTGKTCQQADPCASNPCANGGRCSAFDSHFICTCPPSFHGPTCRLDVNEC
ATTPSPCQNNGVCINEVGSYRCRCPPEYAGTHCERPFQPCQPSPCANGGTCTQTSDTGYA
CTCLPGFTGQDCEHNIDDCVQHACENGGRCIDGVNTYNCHCDKHWTGQYCTEDVDECELS
PNACQNGGTCHNTVGGFHCVCVNGWTGDDCSENIDDCASAACYHGATCHDRVASFYCECP
HGRTGLLCHLDDACISNPCQKGSNCDTNPVNGMAICTCPPGYTGSACNQDIDECSLGANP
CEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECKSNPCQNDATCLDQIGGFHCICMPGY
EGVFCQINTDDCASQPCLNNGKCIDKINSFHCECPKGFSGSLCQVDVDECASTPCQNGAK
CTDGPNKYTCECKEGFTGSMCEIDINECASNPCHYGVCKDGVASFTCACRPGYAGRLCEI
NINECLSQPCRNGGTCLDRENSYTCSCPKGTTGRNCEINVDDCKSNPCDSGKCIDKINGY
ECLCEPGYTGATCNINIDDCVPNPCRNGGTCVDGVNSFTCLCPEGFHDSMCLSQRDECAS
NPCIHGNCQHQANTYVCVCEPGWTGRNCDLNVNECLSNPCVNGGTCRDMTNGYICSCKAG
FTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGELCESVLAPCSARPCKNRG
VCRESEDYQSFSCACPTGWQGQTCEVDINECVKSPCRNGGVCVNSMGGFQCRCNPGFTGD
LCETDIDDCTPNPCSNGGVCVDRVNGFTCVCVAGFRGERCTEDIDECVSAPCRNGGNCTD
CVNSYTCSCPAGFSGINCEINTPDCTESSCFNGGTCVDGINSFSCVCLPGFTGSYCQHDV
NECDSGPCLNGGTCQDGYGTYKCTCPHGYTGTNCQSLVRWCDSSPCKNGGSCWQQGSSFT
CQCASGWTGIYCDVPSVSCEVAAQQQGVSVAVLCRNGGQCVDAGSTHLCRCQAGYMGSYC
QEQVDECVPNPCHNGATCTDYLGGYTCECVAGYHGVNCSKEINECASQPCQNGGTCIDLV
NTYKCSCPRGTQGVHCEIDVDDCSPDVDPETGEPRCFNGGRCVDRVGGYGCVCPPGYVGE
RCEGDVNECLSDPCDPNGSYNCVQLVNSYRCECRTGYTGQRCDTVFDGCKDKPCKNGGTC
AVASNTKHGYICKCPPGFSGSSCEYDSSSCGPLRCRHGATCVAGPRCLCPPGYSGPECQT
RLDSPCASNPCYNGGTCQASAEAPFFHCLCPSHFNGLFCHILDYSFNGGRGLDITPPPAE
SEEAEPGCEVPQCEQRGGDGVCDAACNSHACGWDGGDCSLNFDDPWHECSAALQCWRYFN
DGKCDMQCHSAGCLYDGFDCHQLEGQCNPLYDQYCKDHYSDGHCDQGCNSAECGWDGLDC
AEDVPQRLASGILVLVVHLPPTELLNRSSSFLRQLSALLRTNVALKRHATTGEPLVYPYY
GTEHELSKHTRTAHEWSTNPGPLLQRTARSLSALLKPRHRRELDSMEIKGSIVYLEIDNR
QCYQQSEECFQSATDVAAFLGALASSGNLNVPYIIEAVTSENEAPGRGEMYPMFLALLVL
AVLVLAAVGVVLSRKRKREHGQLWFPEGFKVTETKKKRREPVGEDSVGLKPLKNSDSTLM
DEQLSEWAEEDHCKRFRFDDHTTPDIGIQPDPRQWTQQHLDAADLRLTSIAPTPPRADTD
TDCVDVNVLGPDGLTPLMIASCSGEAGEEEEGEEGVIANFLWHGADPHQRTERAGETALH
LAARYARSDAAKRLLESGADANAQDHAGRTPLHAAVAADAQGVFQILIRNRATDLDARMN
DGTTPLILATRLAVEGMVEELINCHADANAIDDSGKSALHWAAAVNNVEAAVVLLKNGAN
KDLQNNKEETPLFLAAREGSYETAKLLLDHLANRDITDHLDQLPRDIANERMHHDIVRLL
EEYNLVQTPPTLTHSPPICSPEAFLGIRTSPGGTNNTNNVKKPRKPGGKEGGKEMKMKKK
KNGDTNILSPVESDVSSPPMITSPFQQSPPITHHLQGLADSQMGGARLGMAKPFDSAPPR
LSHLGLANNGGGAQTGPCDWLARAQQQQQQGAFSAIMPTMHHGANLPQVMGYPTMQSSHL
GTAAHLLSNHMHQNHLQHRNSNSAPNHGLSHHFLGDISGTELQSNSIQTMLPQETQRLPQ
SMSSTQFLTPPSQHSYSAPMDNTPNHQPQVPDHPFLTPSPGSPDQWSSCSPHSNLSDWSE
GISSPPTSIHMNHIPEAFK
NT seq
7260 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtttctttttgatacccttatttctcgggacggctgtgctgtgtgaggggaaa
ggtctcaggtgtttggagccatgtcagaacggaggaacgtgtgagctcacagccaatgga
aaaccaggctgcagctgtcctgtggactatgcgggtgcccagtgccagttcccaaaccca
tgcagtccatcaccatgccggaatggcggtgtgtgtcgcccacgcacacagggcaatgac
gtggagtttacatgcgactgcacgctgggtttcagtgggccgctgtgcctgacacctgtc
aatcacgcctgcatgagctcaccgtgccgcaatggaggatcctgttcactccttacactc
agcacctacagctgccgctgccctcctggctggacaggtaagacatgccaacaggcggac
ccctgtgcatcaaacccctgtgccaacggtggccggtgctcagcattcgactctcacttc
atctgcacgtgcccacccagcttccacgggcccacatgccgtctggatgtaaacgagtgc
gccacgactccctcaccctgccagaacaacggagtgtgtataaacgaggtgggctcatac
cgctgccgctgcccacctgagtacgctggcacacactgtgagcgccccttccagccctgc
cagccttctccatgtgctaatgggggcacatgcacacagaccagtgacactggctacgcc
tgtacctgcctgccaggcttcaccgggcaggattgtgagcataacattgatgactgtgtt
cagcatgcgtgtgagaatggaggcaggtgtatagatggtgtgaacacatacaactgccac
tgtgacaaacactggacaggtcagtactgcacagaagacgtggacgagtgtgagctgtcc
ccaaatgcctgccaaaatggtggcacatgtcacaatacagtgggcggtttccactgcgtg
tgtgtgaacggctggacaggcgatgactgcagcgagaacattgatgactgcgccagtgca
gcctgctatcacggagccacatgccacgaccgtgtcgcatcattctactgcgagtgccca
cacggacgcactggtctgctgtgtcatctggatgatgcgtgcatcagtaacccatgtcag
aaaggctccaactgtgacaccaaccccgtcaatggcatggccatctgcacctgccctcct
ggctacaccggctctgcctgcaaccaggacatcgacgagtgctcccttggggccaatcca
tgtgagcatggtggccggtgtctgaacaccaagggctcattccagtgcaagtgcctccaa
ggttatgaagggccacgctgcgaaatggacgtgaacgagtgcaagtctaacccatgccag
aacgatgccacctgccttgatcagattggtggttttcactgcatttgtatgccagggtat
gaaggcgtgttttgccagatcaatacagatgactgcgcctcccagccttgtcttaacaat
ggcaaatgcatcgacaagatcaactctttccactgcgagtgtcctaaaggattctctggg
agcctgtgccaagtggatgtagacgagtgtgcaagcacgccatgccagaatggagccaag
tgcactgacgggccaaacaaatacacctgcgagtgcaaagaaggttttacaggctctatg
tgtgagatagatataaacgagtgtgcctcaaacccatgccactacggagtgtgtaaggac
ggtgtggcttcattcacatgcgcgtgtcgccccggatatgctggccgtctgtgtgagatc
aacatcaatgagtgtttgagtcaaccgtgccgtaatgggggtacctgcctagaccgggag
aactcgtacacctgcagctgccctaaaggaaccacaggtcggaactgtgagatcaatgtg
gatgactgcaaaagtaacccatgtgactctggcaaatgtatcgacaagatcaacggatat
gagtgcctgtgtgagcctggatacacaggcgcgacatgtaacattaacatagatgactgc
gtgccgaacccatgccgtaacggtggcacctgtgtggacggcgtgaactcgttcacttgc
ctctgccctgaaggcttccatgactccatgtgcctttcacagcgtgatgagtgtgccagc
aacccctgcatccatggcaactgtcagcaccaggccaatacctatgtgtgcgtgtgtgag
ccgggctggacgggccgcaattgtgacctgaacgtgaacgagtgtttgtccaacccgtgt
gtaaatggtggaacatgccgagacatgaccaatggctacatctgcagctgcaaagcagga
ttcacaggtcctaattgccagactaacatcaacgagtgtgcatccaacccctgcctgaac
cagggcacctgtattgatgatgtagctggatacaagtgcaactgcttgctgccgtataca
ggtgagctgtgtgagagtgtgttagcgccctgctctgcacgcccatgtaagaacagaggt
gtgtgtcgtgagtctgaggactaccagagcttctcctgtgcttgcccaactggctggcaa
ggtcagacatgtgaagtggacatcaacgaatgtgtgaagtccccatgccgtaatggcggc
gtgtgcgtgaactcaatgggtggtttccaatgccgatgtaacccaggattcacaggagac
ctgtgtgagactgacattgacgactgcactcctaacccctgcagcaacggtggtgtgtgt
gtggaccgtgtgaatggcttcacatgtgtgtgtgtggctggatttcgtggtgaacgttgc
actgaggacatcgatgagtgtgtgagtgccccctgccgcaatggggggaactgcacagac
tgcgtgaacagctatacctgcagctgcccagctggattcagcggcatcaactgtgagatc
aacacacctgactgcactgagagctcctgcttcaacggtggtacatgtgtggatgggatt
aactcattctcatgcgtctgtctgcccgggttcacgggcagctactgccagcatgacgta
aacgagtgtgactcaggaccatgccttaacggcggcacatgccaagacggctacggcacc
tacaaatgcacctgcccacatggctacacgggcaccaactgccagagcctggtgcgctgg
tgtgattcatctccctgtaaaaatgggggctcatgttggcaacagggttcttcctttaca
tgtcagtgtgccagtggctggactggcatctactgcgatgtgcccagcgtcagctgtgag
gtcgccgctcagcagcaaggtgtatctgtggcagttctgtgccgtaacggaggccagtgt
gtagatgcaggcagcacacatctgtgccggtgccaggcaggctacatgggcagctactgc
caggagcaggtggacgagtgtgtgccaaacccatgtcacaatggtgcaacctgtaccgat
tacctgggtggatacacctgcgagtgtgtggcgggataccatggggtaaactgcagcaag
gagataaacgagtgtgcgtctcagccttgtcagaatggaggcacctgcatcgacctcgtc
aatacctacaagtgctcctgccctcgaggaactcaaggtgttcactgtgaaatcgatgtg
gatgattgttccccggatgtggatcctgagactggcgagccacgttgttttaatggtggg
cgctgtgtggaccgggtgggtggctatgggtgtgtttgccctccaggctatgtgggtgag
cgatgcgagggtgacgtgaatgagtgcttgtctgacccctgcgacccgaacggatcctac
aactgcgtccagctggttaacagctaccgctgtgaatgccgcacagggtatacaggccag
cgctgtgacactgtgtttgacggctgtaaggataagccctgtaaaaatggtggaacctgt
gcagtcgcgagcaacaccaaacatggatacatctgcaaatgcccacctggtttttcaggc
tcatcttgtgagtacgactcaagctcatgtggccccctgcgctgccgccacggtgctacc
tgtgtcgcgggcccacgctgcctttgcccaccaggttacagtggacccgagtgccagaca
cgccttgattctccatgtgcttccaacccatgctacaatggtggcacgtgccaggcatct
gcagaggccccattcttccactgcctgtgcccatcacacttcaacggcctcttctgccac
atcctggactattcgttcaacgggggccggggtctggacatcacccctcccccagctgaa
tcagaagaggcagagccaggttgcgaggtgccacagtgtgagcagcgaggcggtgacggt
gtgtgtgatgcagcatgtaacagtcacgcatgcggctgggacggcggcgactgttcgctc
aattttgatgacccctggcacgagtgcagtgctgccctgcagtgttggaggtacttcaac
gatggcaagtgcgacatgcaatgtcatagtgctggctgtctctacgatggctttgactgc
caccagctcgagggccagtgcaatcccttgtatgatcagtactgtaaggaccactactcg
gacggccactgcgatcagggctgcaatagtgctgagtgtggctgggatgggttggactgt
gctgaggatgtaccacagcgtctggcatccggcatcctggtgcttgtggtgcacttgcca
cccactgagctgctcaacagatcttcctccttcctccgccagcttagtgccctgttgcgc
accaatgtcgccctcaagcgccatgccaccacaggcgagcctctagtctacccatactac
ggcactgaacatgagctgagcaaacacacacgtaccgcccatgagtggagcacaaatcct
ggtcccctgctgcagcgcactgctaggagcctgtcagcgttgctcaagccccgccatcga
cgagagctggacagcatggagattaaaggctccattgtatatctggagattgataaccgg
caatgttaccagcagtcagaagagtgttttcagagtgcaacagatgtggctgcattcctg
ggagcactggcctccagcggcaatctcaatgttccctacattatagaggctgttacaagt
gagaatgaggcccctggccgtggagagatgtaccccatgtttttggctctcctggtcctg
gctgtgttggtcctggctgcagtcggagttgtgctgtcacgcaagcggaagcgagagcat
ggccagctctggttccctgagggctttaaagtgactgaaaccaaaaagaaacgcagagaa
cctgtgggagaggactcagttggacttaagcctctgaagaactctgatagcactctgatg
gacgagcagctgagtgagtgggcagaggaagaccactgcaaacgcttcaggtttgatgac
cacaccacaccagatataggtatccagccagatccacgtcagtggactcagcagcatctc
gacgcggccgacttgcgcctgacctcgatagctcctacaccaccgcgggcagacacagac
actgactgcgtagatgtgaacgtacttggccccgatggcctgacacctctgatgatcgcc
tcatgcagtggtgaggctggtgaggaggaggagggggaggaaggcgtcattgccaacttc
ctctggcatggcgccgatccacaccagcgtacagagcgtgcaggtgagacggcactgcac
ctggctgcccgttatgcccgatctgatgccgccaagcgccttctagagtctggggcagat
gccaatgcacaggaccatgcaggacgaacaccactacatgctgctgtggctgccgatgca
caaggagtcttccagatcctaattcggaatcgggctacagatctggatgcgcgcatgaac
gatggcacgacgccactcatcctggccacacgcctagcagtggagggcatggttgaggag
ctcatcaactgccatgctgatgccaatgccattgatgactctggaaagtctgctctccat
tgggccgctgctgtcaacaatgttgaggctgctgtagtgcttctgaagaatggagccaac
aaggatctgcagaacaacaaggaggaaacgcccctcttcttggcagcacgtgagggcagc
tacgagacggcaaagctcctcctcgaccacctggccaatcgtgacattacagatcacctg
gatcagctgccacgtgacattgccaatgagcgtatgcaccatgatattgtgcgcctgctg
gaagaatataacctggttcagacccctcccactctcactcattcacccccaatctgctcg
cccgaggctttcctgggcatcagaactagcccgggtggcacaaataacacgaataatgta
aagaaaccccgcaaacctggaggaaaggagggaggaaaggagatgaagatgaaaaagaaa
aagaacggagacacaaacatcctctctccagtggaatcagatgtctcctcacccccaatg
attacatcacccttccaacagtctccacctatcacccatcacttgcaagggttggctgac
tcccaaatgggcggggctcgcctgggaatggcaaagccatttgattcagctcctccacgc
ttgtctcacctcggattggctaataatggaggtggagcccaaacagggccatgtgattgg
ctggcaagggcacagcagcagcagcaacaaggggcattttcagctataatgccaacgatg
caccacggcgctaacttgccgcaagtgatgggttatcccacaatgcaaagcagccacctg
ggcacagcagctcacctgctgtctaaccacatgcatcaaaaccatctgcagcaccgaaac
tcaaactccgcccccaatcatggcctctctcaccacttccttggtgacataagcgggaca
gaacttcagtccaactcaattcaaaccatgctgccacaggagacgcagcgcctgccccag
tctatgtccagcacccagtttctgactcctccttctcagcacagttactccgcccctatg
gacaacacgccaaatcaccagccacaggtccctgatcatcccttcctgactccatcccct
ggctctcctgaccaatggtctagctgctctccacattccaacttatctgactggtcagag
ggaatctcgagcccacccaccagcattcatatgaatcacatccccgaagcattcaagtaa
DBGET
integrated database retrieval system
