Pangasianodon hypophthalmus (striped catfish): 113535803
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Entry
113535803 CDS
T05759
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A-like
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04020
Calcium signaling pathway
phyp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113535803
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113535803
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113535803
Ion channels [BR:
phyp04040
]
Ligand-gated channels
Glutamate (ionotropic)
113535803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
113535803
NCBI-ProteinID:
XP_026785123
LinkDB
All DBs
Position
Unknown
AA seq
1451 aa
AA seq
DB search
MGVAVRLALMAWALLGWSQAAESAPSLSVAVILGETRGVPERALRPAPGIGAPLDISVLA
VQVNYTDPGSMLTHLCQLMARQRLHGLVYGDGTDQEAIAQMLDFVSSQTAMPILGVHGGA
AMTMAEKDDSSSFFQFSASLHQEALLMLAVMEEYDWHVFSVVTTRFPGHQEFVATIRVTV
EHSFVRWDLQSVVTLDGVGEPEDRAHVQLKRIQSPVILLYCSKDEAELVLVEARSLGLVG
AGFVWIVPSLTSGNPERTPETFPPGMISIAYDEWDYPLETRVRDAVGIFSHAAAAMFREQ
GRIPDGTVSCSGQAEKPEVPPSALRRYMMGVNLEGRDLSFMDDGYQVNPKLVVIVLNTER
EWEKMGRWENHSLILKFPVWPRYNSFGDAEADENHLSIVTLEEKPFVIVDDVDILTGTCM
RNSVPCRKHIKDNTTGGSYLKQCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKKINNV
WNGMVGEVVYKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEP
FSASVWVMMFVMLLIVTAIAVFLFEFISPLGFNRNLAQGKDPHGPSFTIGKAIWLLWGLV
FNNSVPVQNPRGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDRKFQS
PYSFSPPFRFGTVPNGSTERNIRKNYPDMHQYMVKYHQSGVQDALISLKTGKLDAFIYDA
AVLNYMAGRDDGCKLVTIGSGYVFATTGYGIALQKGSYWKRLVDLAILGIIGDGEMEELE
AQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLAAAMALSLLTFFWEHLFYWRLRYCFTGL
CSGRPGLLFTISRGIWSCIHGVHIEMKKLPELDFSPQANMLHLLKSAKEITTLGVTSPKR
PVSSLLPPTPGLLELVSGSKGNNLAPKDAIYNNTNTMLANRHKEPLNNTLLPGQCALSLA
DAQSGVAGSGGTGGGGGESGLPASKSRALWKKSVETLRQNQGPTKNSPPPSGPVFEPHAT
MKSQRYLPEDLPACSDMSDCSGRMDLQKQHKVKETLRKRNRLPRDLSDVELSALPGQACQ
QSNHSAQIYSQNSQSSQIYTIDSVDQEHGLHYPDIFNEHRDNKHRPPSSSEQQPILQLNS
NLFPQAHEPDVMQNATTAAKEKKYNTYGKPGGVGLSPAVTTAAQDHRQTHCRSCLSKFSG
YSGLYTMRPPQYRCEACLHSANLYDISEDQFLHPNVGAIRGGSVDRSFCAFLPHPNASFT
AYLPQSDQEGEGLISHYQNEGIYIHRQHSYENLPQKNSSRRVSLQDNTPHTNLHTSTMVP
DKLPKSQSAQFNHTLASVGVSGLGIGRRSKSMYPARPTENPFLQTLRDDQRLAHGRSSTD
IYKQLVPLTLSPVVDGKGLGIGVATPDLFYPEHVMPYVALSPVGTFPAPRAMSAGGARRV
YKRMPSIESDV
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcgcagtacgcctggcactgatggcctgggctctgctgggctggtctcaggca
gctgagagcgcaccctctctgagtgtggcggtgatcctgggcgagactcgtggtgtcccc
gaacgggcattgcgcccagcaccaggcattggagcaccactggacatcagtgtgctcgct
gtgcaggtgaactacacggacccaggcagcatgctcacccacctgtgccagctcatggca
cgtcagcgattgcatggccttgtgtacggtgacggaactgaccaggaagctatcgcccag
atgctggactttgtctcttcccagactgccatgcccatcctgggcgtccatggaggtgca
gccatgaccatggctgagaaggacgacagctcctcttttttccagttcagcgcctcactc
catcaagaagccctgctcatgctggctgtcatggaggaatacgactggcacgtcttctcc
gtcgtaacgaccaggttccccggtcaccaggagttcgtcgccaccatccgcgtgaccgtg
gagcacagtttcgtgcgctgggacctgcagagcgtggtgacgctagacggcgtgggcgag
cctgaggacagagcgcacgtgcagctcaagcgcatccagtcgcctgtcattctgctctac
tgctccaaggacgaggccgagctggtgctggtcgaggcccgatcgctcgggttggtcggc
gccggcttcgtgtggatcgttcccagtcttacatccggcaacccagagcgcacacctgaa
acctttcccccgggaatgatttccatagcgtacgacgagtgggactatccgctggaaacc
cgcgtgagggacgcggtggggattttcagtcatgccgcggccgccatgtttcgagagcaa
ggccgcataccggacggaacagtcagctgctcgggtcaagcggagaagccagaggttcct
ccaagtgcgttacgcaggtatatgatgggtgtaaatctggagggcagagatctgtcgttc
atggacgatggttatcaggtgaaccctaaactggtggttattgtactcaacaccgagagg
gaatgggagaagatgggccgctgggagaaccattcgttgatactgaaatttcccgtgtgg
cctcggtacaactcctttggagacgcagaagcggatgaaaatcacctgagcatcgtgacg
ttagaggagaagccgttcgttatcgtggacgacgtggacattctgacggggacgtgcatg
cgcaactctgtcccctgcaggaaacacatcaaagataacactacaggtggatcgtatcta
aagcagtgctgtaagggcttctgtatcgatatcctgaagaaaatcgccaggaacgtaaag
ttcacgtacgacctttatctggtgactaacggcaaacacggcaagaaaatcaacaacgtg
tggaacggcatggtgggcgaggtggtctataagaaggccgtgatggctgtcggttcgttg
accataaatgaggagaggtcagaggtcatcgacttctccgtgccgttcgtagagacgggg
atcagcgtcatggtttcccgcagcaacggaaccgtatcgccctcggcctttctggagccg
ttcagcgcgtcggtgtgggtgatgatgttcgtcatgttactcatcgtcaccgcaatcgcc
gtcttcctgtttgagttcatcagtccactgggtttcaacagaaacctcgcgcagggcaaa
gaccctcatggtccgtctttcaccattggcaaggccatctggcttctgtggggtctcgta
ttcaataactctgtaccagtacagaaccctagaggcacgaccagtaagttcatagtgtcc
gtgtgggccttctttgccgtgatcttcctggccagttacactgcgaacctggctgccttc
atgatccaggaggagtttgtggaccaggtcactgggctcagtgacagaaaattccagagc
ccgtattccttctcgccgccatttcgttttggtacagtaccaaatggcagcactgagagg
aacatcaggaagaactacccagacatgcaccagtacatggtcaagtaccaccagtctggc
gtccaggatgcactgatcagccttaagacgggcaagctggatgcgttcatctacgacgcg
gctgtgttgaactacatggcagggagagatgacggctgtaagctggtgaccatcggcagc
ggctacgtcttcgccaccactggttacggtatcgccctccagaaaggatcctactggaag
cggcttgtggaccttgccattctagggatcattggggatggtgagatggaggagctggag
gctcagtggctcacgggtatctgccataatgagaaaaatgaagtgatgagcagtcaactg
gatgtggacaacatggctggtgtgttctacatgctggcagctgccatggcgctctctcta
ctcaccttcttctgggagcacctgttctactggcgactgcgttactgcttcactggatta
tgctcgggacgacctggacttctctttaccataagcaggggtatctggagttgtattcat
ggtgttcatattgagatgaagaagcttcctgagttggattttagtcctcaggccaacatg
ttgcacctgctgaaatcagccaaagagattaccactctgggggtaacctcacctaaacgg
cccgtctccagcctcctccctcctacgcccggactgctagaacttgtgagtggtagcaaa
ggaaataaccttgctccaaaagatgcaatctacaacaataccaacaccatgcttgcaaac
cgccacaaagaacctctaaacaacacccttttgccaggtcagtgtgcccttagcctagct
gatgcccagtctggtgtagcaggtagcggaggcacaggaggtggtggtggtgaatcagga
ctacctgcttccaagtcccgtgctctctggaagaagtcagttgaaactctgcgacagaac
caaggacctaccaaaaattccccacctccctctggaccagtctttgagccacatgctact
atgaaaagccagaggtatttgcctgaagacctgcctgcatgctcagacatgtctgattgt
tctggccgcatggacctacagaagcagcacaaggtcaaagagacgctccggaagcgtaac
cgcctgccacgggacctaagtgacgtagaactctctgcattgcccggccaagcctgccag
cagagcaatcacagtgctcagatctattcccagaatagtcagagcagccagatctacacg
attgactctgtagatcaggagcatggactacactacccagacatattcaacgagcacaga
gacaacaagcatcgccctccgtcttcttcagagcaacagccaatactgcagcttaacagc
aacctgttccctcaggctcacgagccggacgtcatgcagaacgccacaactgctgccaag
gagaagaagtacaatacttacggaaagcctggtggggtaggactcagtccagcagtgacc
actgccgcccaggaccacagacaaacccactgccgtagctgtctttcaaagttctccggc
tattctgggctttatactatgcgacctcctcagtatcgctgtgaggcctgtctgcattct
gccaacctgtatgacataagtgaggatcagttcctgcaccctaacgtaggtgccattcga
ggcgggagtgtagacaggagcttctgtgcatttctgccacatcccaatgcttccttcacg
gcctaccttccccaaagcgaccaggaaggagaagggctgattagtcactatcagaacgag
ggcatttacatccatcgccagcactcttatgagaacctgcctcaaaagaattcatcacga
cgcgtgagccttcaggacaacactcctcacactaacctgcacacatccaccatggtcccg
gataagcttccaaagagccagtcggcacagtttaaccacacgcttgcttcagtaggcgtt
agcgggcttggcattggccggcgcagcaaatcaatgtacccagcacgtccaaccgagaac
cctttcctgcagacgctccgcgacgaccagcgcctggctcatggccgcagctccacggac
atttacaaacagctggtgccacttacattaagtccagttgtcgacggcaaggggctcggc
ataggggtggcgacacctgacctcttttaccccgagcatgtaatgccttatgtagccctt
tccccagtcggcacattcccagccccgagagcaatgagtgccggtggtgcacgacgcgtc
tacaagaggatgcccagcattgaatccgacgtctga
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integrated database retrieval system
