Pangasianodon hypophthalmus (striped catfish): 113537708
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Entry
113537708 CDS
T05759
Name
(RefSeq) exportin-1-like
KO
K14290
exportin-1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03008
Ribosome biogenesis in eukaryotes
phyp03013
Nucleocytoplasmic transport
phyp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113537708
03008 Ribosome biogenesis in eukaryotes
113537708
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113537708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113537708
03009 Ribosome biogenesis [BR:
phyp03009
]
113537708
03016 Transfer RNA biogenesis [BR:
phyp03016
]
113537708
03036 Chromosome and associated proteins [BR:
phyp03036
]
113537708
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113537708
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
113537708
Pre-60S particles
113537708
Transfer RNA biogenesis [BR:
phyp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
113537708
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113537708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_3
IBN_N
DUF3385
BspA_v
Motif
Other DBs
NCBI-GeneID:
113537708
NCBI-ProteinID:
XP_026788135
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MPADMTMLADHTARQLLDFSQKLDINLLDNVVNSMYYDVGSQQRLAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPSVV
EKEGVYLAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVSLFTLTMMQLKQHPEV
YLTHLDYADTERIMTEKLHNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIK
DLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQD
MACDTFIKIAQKCRRHFVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIG
AQTDQAVQEHLIEKYMLLPNQVWDSIIQQATKNVDILKDPETVRQLGSILKTNVRACKAV
GHPFVVQLGRIYLDMLNVYKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGW
VSRSNDPQMVGENFVPPLLEAVLIDYQRNVPAAREPEVLSTMATIVNKLAAHITVEIPKI
FDAVFECTLNMINKDFEEFPEHRTNFFYLLQAVNSHCFPAFLSIPPAQFKLVLDSIIWAF
KHTMRNVADTGLQILYTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMH
ASILAYMFNLVEEGKISITLNTGTPINNQVYVQEYVANLLKTAFPHLQDAQVKVFVTGLF
SLNQDIPAFKEHLRDFLVQIKVSLTLRYRVAHTPSSSSVKFT
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagatatgacaatgttagcggaccatacagcccggcagctgctggacttctct
cagaagctggacatcaacctgctcgacaacgtggtcaactccatgtactacgacgtcggc
tctcagcaacggctggcacaggaagtcctgactaacttgaaggatcacccggatgcatgg
accagagtggacaccatcttggagttctctcagaacatgaagaccaaatactacgccctt
cagattctggaaactgtcattaaaacacgctggaaaattctcccgagaaaccagtgtgaa
ggaattaagaaatacgtcgtggggctgattatcaagacgtcctcagatccttctgtggtc
gagaaagagggagtttacctggcaaagctgaatatgatcttggtgcagatcctgaagcag
gagtggccgaagcactggcccacgttcatcagcgacattgtgggagcgagtcgcacgagc
gagagcctctgccagaacaacatgatcatcctgaagctgctcagcgaggaggtgttcgac
ttctccagtggacagatgactcaggtcaaagccaagcacctgaaagacagtatgtgcaac
gagttctcccagatttttcagctctgccagtttgtcatggaaaattcccagaatgctcca
ctggtccatgccacgttggagaccctcctgcgcttcctgaactggattccactgggctac
atttttgagaccaaactcatcagcaccctggtttacaagtttctgaacgttccgatgttt
cgaaacgtgactctgaagtgtctgacggaaatcgccggcgtcagcgtcaatcagtacgag
gagcagttcgtcagcctcttcactctaaccatgatgcagctcaaacagcatccagaagtg
tacctgacccatttggactatgcggatacggagaggatcatgacggagaagctccataac
caggtgaacgggacagagtggtcctggaggaacctgaacacgctgtgctgggccatcggc
tccatcagcggagccatgcacgaggaggacgagaaacggttcctcgtcacagtcattaag
gacctgctggggctgtgcgagcagaagagggggaaagacaacaaggccatcatcgcctcc
aacatcatgtacattgtagggcagtacccacggttcctccgcgcccactggaagttcctc
aagacggttgtcaacaagctcttcgagttcatgcacgagacgcatgacggcgtgcaggac
atggcgtgtgacacgttcatcaagatcgctcagaagtgcaggaggcactttgttcaggtg
caggtcggggaggtcatgcccttcatcgacgagatcctgaacaacatcaacaccatcatc
tgcgacctgcagccgcagcaggtgcatacgttctacgaggctgtaggctacatgatcggc
gctcagacagaccaggcagtgcaggagcacctgatagagaagtacatgctgctccctaac
caggtgtgggatagcatcatccagcaggccaccaagaacgtggacatcctgaaggacccg
gagacggtgcgtcagctgggcagcatcctgaagaccaacgtgagggcgtgtaaggccgtg
ggtcacccgttcgtcgtgcagctgggacgcatctatctagacatgctcaacgtctacaag
tgtctgagtgagaacatctcctctgccatccagaccaacggtgagatggtgacaaagcag
cctctaatcaggagcatgcgcacggtgaagagagaaactctgaagctcatctctggctgg
gtcagccgttccaacgatccccagatggtcggggagaactttgttccccctctgctcgag
gccgtgctgatcgactatcagcggaacgtccctgccgctcgagagcctgaagtgctcagc
accatggcaaccatcgtcaacaagctcgcagcccacattactgtggaaatccccaagatt
ttcgatgctgtatttgagtgcaccttaaacatgatcaacaaggactttgaggagttccca
gagcacaggacaaacttcttctacctgctgcaggcggtgaactcgcactgcttccccgct
tttctgtccatcccgccggcgcagttcaaactggtgctggactccatcatctgggcgttt
aagcacaccatgaggaacgtagctgacacgggtctgcagattctgtacacgttgctgcag
aacgtggcccaggaagaagctgcagctcagagcttctatcagacgtacttctgcgacatc
ctgcagcacatcttctccgtcgtcaccgatacgtcccacacggcgggtttgacgatgcac
gcctccatcctggcctacatgtttaacctagttgaggaggggaaaatcagcataaccctg
aacacaggcacccccatcaacaaccaggtctacgtacaggaatatgtggccaacctgctg
aaaactgccttcccacacctacaagacgcgcaggtgaaagtattcgtaaccggtctgttc
agcttaaatcaggatattcctgcgttcaaagagcaccttcgggacttcctggtgcagata
aaggtatcccttacgctccgatatcgggtcgcacacactccgagttcatcaagtgtgaaa
tttacataa
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