Pangasianodon hypophthalmus (striped catfish): 113537867
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Entry
113537867 CDS
T05759
Symbol
raf1
Name
(RefSeq) RAF proto-oncogene serine/threonine-protein kinase isoform X1
KO
K04366
RAF proto-oncogene serine/threonine-protein kinase [EC:
2.7.11.1
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04012
ErbB signaling pathway
phyp04068
FoxO signaling pathway
phyp04140
Autophagy - animal
phyp04150
mTOR signaling pathway
phyp04210
Apoptosis
phyp04218
Cellular senescence
phyp04270
Vascular smooth muscle contraction
phyp04370
VEGF signaling pathway
phyp04371
Apelin signaling pathway
phyp04510
Focal adhesion
phyp04540
Gap junction
phyp04625
C-type lectin receptor signaling pathway
phyp04810
Regulation of actin cytoskeleton
phyp04910
Insulin signaling pathway
phyp04912
GnRH signaling pathway
phyp04914
Progesterone-mediated oocyte maturation
phyp04916
Melanogenesis
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113537867 (raf1)
04012 ErbB signaling pathway
113537867 (raf1)
04370 VEGF signaling pathway
113537867 (raf1)
04371 Apelin signaling pathway
113537867 (raf1)
04068 FoxO signaling pathway
113537867 (raf1)
04150 mTOR signaling pathway
113537867 (raf1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113537867 (raf1)
09143 Cell growth and death
04210 Apoptosis
113537867 (raf1)
04218 Cellular senescence
113537867 (raf1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
113537867 (raf1)
04540 Gap junction
113537867 (raf1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
113537867 (raf1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
113537867 (raf1)
09152 Endocrine system
04910 Insulin signaling pathway
113537867 (raf1)
04912 GnRH signaling pathway
113537867 (raf1)
04914 Progesterone-mediated oocyte maturation
113537867 (raf1)
04916 Melanogenesis
113537867 (raf1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
113537867 (raf1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113537867 (raf1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
phyp01001
]
113537867 (raf1)
Enzymes [BR:
phyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
113537867 (raf1)
Protein kinases [BR:
phyp01001
]
Serine/threonine kinases: TKL group
RAF family [OT]
113537867 (raf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
RBD
C1_1
Kinase-like
ABC1
zf-RING-like
Pkinase_fungal
C1_2
Motif
Other DBs
NCBI-GeneID:
113537867
NCBI-ProteinID:
XP_026788335
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MKLLLTLSPSSLMEHVQGTWKTLSNGFGFRDSVFEDSCMSPTITKSFPYRRRSSDDGKIT
NPSKANTIRVYLPNQQRTVVSVRPGMTLHSCLIKALKVRGLQPECCAVFRLHPEQPRNKK
SRMDWNTDSTSLIGEELVVEVLDHVPLTTHNFVRKTFLKLAFCDICQKFLLHGFRCQTCG
YKFHEHCSTKVPTMCVDWSNIRQLLLFPTPGEGGTPSLPPLSSRRMRDSLSRLPSSAHHR
HSTPHAFNYIAPLPPSSGSLSQKQRSTSTPNVHMVSSSLPAGGASSEDASKSQDSGRPPN
LSPTGWSQAKTPGPVHREKASSSNTQDKNRIRPREKRDSCYYWEIDASEVVLHSRIGSGS
FGTVYKGKWHGDVAVKILKVKDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAI
VTQWCDGSSLYKHLHVQDTKLQLFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEG
LTVKIGDFGLATVKARWSGSHQVEQPSGSILWMAPEVIRMQDSNPYSFQSDVYSYGIVLY
ELMTGELPYSMVANRDQIIFMVGRGYLSPDLSKLYKSCPKAMKRLVADCIKKSKDDRPLF
PQILASIELLQHSLPKINRSASEPSLHRAAHTDDISICTLTSTRLPVF
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaattattgttgacattatcgccatccagcctgatggagcatgtccaagggacctgg
aagaccctgagtaatgggtttggattcagagactcagtgtttgaagattcctgcatgtct
cctacaataaccaaaagctttccttatcgcagacgctcatcggacgatgggaaaatcaca
aacccttccaaagctaacacgattcgcgtttatctgccaaatcagcagcgcactgtggtg
agtgtacgaccaggcatgaccctgcacagctgcctcatcaaggcccttaaagttcgaggc
ctccagcccgagtgctgtgctgtgttcaggctccatccagaacagcctcgaaacaaaaaa
tctcgtatggactggaacactgattctacctcactcatcggggaagagctggtggtagaa
gtcttagatcacgtaccgctaacgacacacaattttgtacgaaagacgtttctgaagctg
gccttctgtgacatttgccagaagtttcttttacatggcttccgatgtcagacgtgcgga
tacaaattccacgagcactgcagcaccaaagtccccaccatgtgtgttgactggagcaac
attcgacagctccttttgtttcccacacctggagaaggtggaactccatcgctaccgcct
ctctcatctcggaggatgcgagactctttatcccgacttccttccagtgctcatcacaga
cactccacacctcatgcctttaactacattgcgcccttgccaccctccagcggttctctc
tcccagaaacagcgctccacatccacacccaacgtccacatggtcagcagcagcctgcct
gcgggcggggcttcgtctgaggatgcctcaaaaagtcaggactcaggaagacctcctaat
ctcagtcccacaggctggtctcaggccaaaactccaggccctgttcatagagaaaaggca
tcttcatctaatactcaggacaaaaacagaatacgacccagggagaagcgagactcttgc
tactactgggagatcgacgccagcgaggtggttctgcactcccgcattggatcagggtca
tttgggacagtttacaaagggaaatggcacggtgatgtcgctgtgaagatattaaaggtc
aaagatcctacaccagagcagtttcaggcttttcgcaatgaggtggcggttctgagaaag
actcggcacgtcaatatcttgctatttatgggctacatgaccaaagataacctggccatc
gtgacccagtggtgtgatggaagcagcctctataaacacctgcacgtccaggacaccaaa
ctgcagctgttccagctgattgacatcgccagacagaccgctcaaggcatggactatttg
catgcaaagaacataatccaccgggacatgaagtcaaacaacatcttcctccatgaaggc
ttaacagtgaagatcggagactttggtttggccacggtgaaggcaaggtggagcggctcg
catcaagtagagcagccttcaggatctatcctttggatggctcctgaggtgatcaggatg
caggacagtaatccctacagtttccagtcagacgtctactcctacggtattgtgctttat
gagctgatgaccggggagctcccatattctatggttgcaaacagagaccagatcatcttc
atggtaggaagaggttacttgtctccagacctaagcaaactgtataaaagctgccccaaa
gccatgaagagacttgtcgctgactgcattaagaagtcgaaagatgacaggccgctgttc
cctcaaattctggcatcgatagagctgctgcaacactcgcttcccaaaatcaaccgcagc
gcgtctgagccgtctcttcacagagccgcacacacggacgacatcagcatttgcactctg
acctccaccaggctgcctgtcttctaa
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