Pangasianodon hypophthalmus (striped catfish): 113541171
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Entry
113541171 CDS
T05759
Symbol
chrnd
Name
(RefSeq) acetylcholine receptor subunit delta isoform X1
KO
K04816
nicotinic acetylcholine receptor delta
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113541171 (chrnd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113541171 (chrnd)
Ion channels [BR:
phyp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
113541171 (chrnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
113541171
NCBI-ProteinID:
XP_026793802
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MKPVFYLLPVLLSCFLSGCSGRNEEERLINHLLKERGYNKELRPVQNKDETVMIYLSLML
SNLISLDEVSETLLTNVWMEHSWTDHRLAWNTSEFDDISILRLPSSMVWLPEIVLENNND
AQFEVAYYCNVLVDSTGYVYWLPPAIFRSSCSINVYYFPFDWQNCTLKFSSLTYNAKEIS
LNLKEEQDPDSQKTYHVEWIIIDPEGFTENGEWEIIHRPARRNIYKSIPMDSNKHQDITF
YLIIKRKPLFYIVNIIIPCVLISFLASLVYYLPADSGEKMTLSISVLLAQSVFLLLISQR
LPETSMAVPLIVKYLMFIMVLVTVVVLNCVIVLNLHFRTPSTHFMTEWTKEFFLEKLPRF
LHMSRPVESELQWEGALPRRSSSVGYIAKAEEYYSLKSRSELMFEKQSERHGLATRPTPT
AVYKSSSDSEVTDQLYNELKPAVEGANYIVKHMHNKNDYNEEKDNWSGIARTVDRLCFYI
VTPVMTIGTICIFLMGIYNHPPPLPFEGDSFTYREADKRFI
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgttttttatctgcttccagttttactctcctgctttctgtcaggatgcagc
ggcaggaacgaggaggagcgtctcatcaatcacctgttaaaagagcgtggatacaacaaa
gagctgcgtccagtgcaaaacaaagacgagacggtgatgatttatctctcactaatgctc
tccaatctcatctctctggatgaagtcagtgaaactttactgacgaatgtgtggatggaa
cacagctggactgaccacagacttgcgtggaacacgtctgagtttgatgacatcagtatc
ctgcgcctgccctccagcatggtgtggcttccagagatcgttttggagaacaataacgac
gcccagttcgaggtggcttattactgtaacgtgttggtggactccaccggatacgtgtac
tggttgcctcctgctatcttccgtagttcctgttccatcaacgtctactattttcctttt
gactggcaaaactgcaccctaaagttcagctctttaacttacaatgccaaagagatcagc
ttaaatttaaaagaagagcaggatccggacagccagaagacctaccatgtcgaatggatc
atcatcgaccctgaaggattcacagaaaatggtgagtgggagatcattcacagacctgcg
agaagaaacatctacaagagcatccctatggacagcaacaagcaccaagacatcaccttc
tacctcatcatcaaacgcaagcctctgttctacatcgtcaacatcatcatcccctgtgtg
ctcatctccttcctggcctcgctggtgtactacctgcctgcagacagtggtgagaagatg
accttgtccatctcagtgctcttggcccagtctgtgttcctgctcctgatatctcagcgc
ttacccgagacctccatggctgttccgctgatcgtcaagtatctgatgttcatcatggtt
ctggtcactgtggtggtgttgaattgcgtcatcgtgttgaacctccacttcaggaccccc
agcacacacttcatgacggagtggaccaaagagttcttcctggagaagcttcctcgtttc
ctccacatgtcgcgtccggttgagagcgagctgcagtgggagggagcgctgcccagacgc
tccagctccgtgggttacatcgccaaagccgaggaatactacagcctcaagtcccggagt
gagctgatgttcgagaagcagtcagagagacacggcctggccacgaggcccacgcccacc
gccgtgtataaatcgagcagtgactcggaggtgaccgatcagctgtataatgagctgaag
ccggctgtggaaggagcgaactacatcgtcaagcacatgcataacaaaaacgactataac
gaggagaaggataactggagtgggatcgccaggacggtggaccgtctctgtttctacatc
gtgactcccgtcatgaccatcggaaccatctgcatcttcctgatgggaatctacaaccat
ccgcctcctcttccgtttgagggagactcgttcacttacagagaggcagacaaacgcttt
atatga
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