Pangasianodon hypophthalmus (striped catfish): 113542368
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Entry
113542368 CDS
T05759
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113542368
Transporters [BR:
phyp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
113542368
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Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
113542368
NCBI-ProteinID:
XP_026795650
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MGDQHTHTHTSMHHHELAASANPGLVPVPVILQTESRDKWGKKVDFLLSVIGFAVDLGNV
WRFPYICYQNGGGAFLIPYTLMAIFGGVPLFYMELALGQFHRTGAISIWKHICPIFKGIG
FAICIIALYVSFYYNTIIAWALFYFYSSFSSTLPWTNCDNAWNTENCTNYFGKDNVTWTN
YSRSPAEEFYTRNVLELHESEGLENVGVIRWQLMLCLFLIFTIVYFSLWKGVKTSGKVVW
VTATLPYVVLLILLIRGATLPGAWRGVVFYLQPKWEKLKDTTVWVDAAAQIFFSLGPGFG
VLLALSSYNPFNNNCYRDAIVTSLVNCLTSFMSGFVIFTVLGYMAEQRHVNVEDVARNKG
PSLLFITYPEAIANMMGSTFFAIIFFAMMITLGLDSTFGGLEAIITAIMDEYPDFLSHRR
EVFVLGLVAVCFLGSLSTLTKGGAYVVKLLEEFGVGSSIIAIVFLEATAVSWFYGINRFS
NDVKAMLGYTPGIFWRFCWVAISPTFLAYIIISSLLNPAPLMMFDYKFPDWSITVGYIIG
FSSFIWIPVYMVYKLVWTPGSLKQRLAVCLRPERTLPDIHTDTLGLTPVP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatcaacacacacacacacacaccagcatgcaccatcacgagttggcggcgagc
gcgaaccccggtctggttccggttccggtgatcctgcagacggagtcgcgcgacaaatgg
ggcaaaaaagtcgacttcctgctgtcggtgatcggctttgctgtggatctggggaacgtg
tggcgatttccttacatctgctaccaaaacggcggaggagccttcctcatcccctacacc
ctcatggctatatttgggggtgtaccactcttctacatggagctggctctgggtcagttc
caccgcacaggtgccatctccatatggaaacacatttgcccaatattcaaaggcatcggt
ttcgccatctgcatcatcgcgctgtacgtctcgttctactacaacaccatcattgcgtgg
gcgctgttctacttctactcatcgttcagcagcactctgccatggacgaactgcgacaat
gcatggaacacggaaaactgcaccaactactttggcaaggacaatgtgacgtggactaac
tactcacgttcaccagccgaggagttttacacgaggaacgtgttggagctgcacgagtca
gagggtttggagaacgtgggtgtgatccgctggcagctgatgctgtgtctgttcctgatc
ttcaccatcgtctacttcagcctatggaaaggagtcaaaacatcgggcaaggtggtttgg
gtcacagccactcttccctacgtggtgttactgattttgttaattcgaggtgcaacgtta
cctggagcgtggaggggcgttgtcttctacctgcagcccaaatgggagaaacttaaggat
acaactgtttgggtggacgcagcagctcagatcttcttctccctcggcccggggtttggc
gttctgcttgctctatccagctacaacccgttcaacaacaactgctacagagacgccatt
gtgacgagtttggtaaactgcctgaccagcttcatgtctggttttgtgatttttaccgtt
ctgggctacatggctgagcagagacatgttaacgtggaagatgtagccagaaacaagggc
ccaagtcttctgttcatcacttacccagaagccattgccaacatgatgggctccacgttt
ttcgccatcatcttctttgcgatgatgatcacactgggattggacagcacgtttggaggg
ctggaagccatcatcactgccatcatggatgagtacccagactttctgtcccacaggaga
gaggtattcgtgctgggcctcgtggctgtgtgctttttgggctctctgagcactcttact
aaaggcggtgcgtatgtcgttaaactactggaagagtttggagtcggatcctccataata
gccatcgtgtttttggaagccactgcagtctcctggttttatggcatcaacagattcagc
aacgacgtcaaagccatgttgggatacacacccggaatcttctggaggttttgttgggta
gccatcagcccgacttttctagcgtacatcatcatcagctctctgttgaatccggccccg
ctgatgatgttcgattacaagttccccgactggagcatcacggtgggttacatcattgga
ttctcgtctttcatctggatccccgtctacatggtgtataagctggtgtggacgcccggc
tcgctcaaacagcgtctggctgtttgcctgcggcccgaacgaactctgcctgacatccac
acagacacgctgggtttgactccggtaccttaa
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