Pangasianodon hypophthalmus (striped catfish): 113543599
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Entry
113543599 CDS
T05759
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00780
Biotin metabolism
phyp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
113543599 (hlcs)
Enzymes [BR:
phyp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
113543599 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
113543599 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
113543599 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
113543599 (hlcs)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
113543599
NCBI-ProteinID:
XP_026797755
LinkDB
All DBs
Position
Unknown
AA seq
881 aa
AA seq
DB search
MLITLCYVYLWVRFQKCYTGVIRSVLFRLHANRSSFAFCAQTFSSLQSPTSAEDTVFLQL
GNKVIYITEPQACDDLSKWTLLLSSSLVTAPKLENIAFIIEATTKQTAVHSRPSSNKKAL
NWSDYCLPLACRPGQPYRAVAEASLDNFSTLGVAFLEDRLQMGNGLIPEKIVSVLLRESA
LKELFEKQQSGLEKKPDPVLSSFPKDTVLSSASPCEQWAEDIPQDLGKNTCGPLSDQKVE
PEHKTDHHHMDGHHLHLSSCQECLELENSTIQSVKYASVENIPDLPDDYTDTDVEEEADE
SFSAWRRFDNTNSKPPNVLVYTGGCEEHYRHVHSLLAECIDTDRYAIYPLRPQQALEEPW
LENTLLLVLATEETLTPGLQLRFLTYLGQGGKVLGLSCSLCPAGLRLHSREEQRGQICSL
NFTKSDSTEVHLSVLTSGNVYIREPHDASSGEVELWGELSAKGEEENDMVIVRVTHGEDG
GEAVLCQVHLESAPDSEQVQVSAGFSELKMSNAKRYEVLTEILTSLGLSCELNQVPQPSP
IYLLSTQSKLKNAFVRWLREHVDGKDTVRSQKTSLRVIWGQEVLSELGDGELALHTEAPE
FLSEHFSMEAYRQHLHSQRLGHTLLYADVTPSTMDLLEGLMLQLPEDMGLIAVAARQTKG
KGRGGNAWLSPVGCAMFTLPLQVAVSSRLGQRIPFLQHLAALAMVEAVRTLPGYEDIDLR
VKWPNDIYYGNLMKLGGVLVTSTVMGSTFHLLIGCGFNVSNSNPTICVNDLVVQHNREQG
SKLSPLSPGQLIGRSVTLLEQLISDFQLHGPEAVLPIYYKRWVHGGTKVRLWSEDGPEAE
VVGLDDHGFLQVSSRDQGLVSVQPDGNSFDMLRNLVVTKHN
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgttaataacgctatgttatgtctacctctgggtgcgctttcagaaatgctacacgggg
gtcattcggagtgttttgtttagactgcacgcaaaccggagcagcttcgccttctgcgcg
cagacattcagcagcctgcagagtcccacctcagccgaggacacagtcttccttcagctg
ggcaacaaggttatttacatcaccgagcctcaagcatgtgatgacctgagcaagtggact
ttgttgctcagctcttctttggttactgctccaaaactagagaacatcgcttttattata
gaagctacaacaaaacagacagctgtacactctcgtccatcatcaaacaagaaagcactg
aattggtcagactattgccttcctctggcctgcagaccagggcagccataccgggcagtg
gctgaggcgagcctggacaacttcagcactcttggagtggctttcctggaagaccgactg
caaatgggaaatggcctcattcctgaaaaaatagtttcggtgttgctaagggaatctgcg
ctgaaggaactctttgagaagcagcaatcaggcttggagaaaaagcctgacccggttcta
agcagctttccaaaggacactgttttgtcttcggcttctccgtgtgagcagtgggccgaa
gatattccgcaagacctcgggaagaacacatgtggaccattgagtgaccagaaggtggaa
ccagagcacaaaactgaccatcatcacatggatggccaccacctgcacctctccagctgc
caagagtgcctggagctggagaacagcaccatccaatcagtgaaatatgcctcagtcgag
aacatcccagacctgcctgatgattacacagacactgatgtagaggaggaagccgatgag
agtttctcggcctggagaaggtttgacaatacaaacagcaaaccgcccaatgtgcttgtg
tacacaggcggctgtgaggagcactacagacacgtgcactcacttctggctgaatgcatt
gacactgatcgctatgctatctaccccctgcggccacagcaggcacttgaagagccgtgg
ctagaaaacacactgctcctggtgctggccacagaagaaacactcacgcctgggctgcag
ctgcgctttctgacatacctaggccagggtggtaaagtcctgggtctgtcctgttcgttg
tgcccagccgggctcaggctacattcccgggaggagcaacgaggccaaatctgcagcctg
aacttcactaaatctgatagcacagaggtacatctaagcgtgttaaccagtgggaatgtt
tatatacgtgaaccgcatgatgctagcagcggagaggtggagttgtggggagagctgagt
gccaagggcgaagaggagaatgacatggttattgtcagagtcactcacggcgaggatggt
ggagaagctgtattgtgtcaggtgcatttggagtccgctccagactctgaacaggtgcag
gtcagtgcaggcttctcagagctgaagatgagtaatgcaaaacgctatgaggtcctgaca
gaaatcctcacctctctaggccttagctgtgaactgaaccaggtgcctcaaccaagcccc
atttacctgctttccactcagtcgaagctgaagaatgcatttgtgcgctggctgagagag
catgtggatggtaaggacactgtacgctctcagaagaccagcctaagggtgatatggggc
caagaggtgctgagcgagttaggcgacggagagctagcactgcacactgaggccccagaa
tttctctctgagcatttcagcatggaggcatacaggcagcacctgcacagccagcggctg
ggacacacactgctctacgcagatgtcactccttccaccatggacctgctagagggattg
atgttgcagttaccagaggatatggggttaattgctgtggcagcacgtcagactaagggc
aaagggcgaggggggaacgcgtggttgagcccagtgggttgcgccatgttcacgctgccc
ttgcaagtagcggtgagctcccgacttggccagagaatccccttcctgcagcacctggct
gctcttgctatggtggaggctgtgcgcacactgcctggatatgaggacattgacctgagg
gtgaagtggcccaatgatatttactatggtaacctgatgaagctcgggggagtgctggtc
acatcaactgttatgggatccacttttcacctcctcattggttgtgggtttaatgtgagc
aacagtaaccccaccatctgcgttaatgacctggtggttcagcataatcgtgagcaaggg
agcaagctgagtcctctaagcccaggacagctcatcggccgctctgtcactctgctagag
cagctcatttctgactttcagctgcatggccctgaggcagtcctgcccatttactacaaa
agatgggtgcatggtggtacaaaggtgcggttatggagtgaggatggtcctgaggctgag
gtggtgggactggatgatcacggcttcctgcaggtgagctctcgagaccagggtctggtg
tctgttcagcctgatggaaactccttcgacatgctgagaaacctggtcgtcaccaagcac
aactag
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