Pangasianodon hypophthalmus (striped catfish): 113545893
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Entry
113545893 CDS
T05759
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00310
Lysine degradation
phyp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
113545893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113545893
03036 Chromosome and associated proteins [BR:
phyp03036
]
113545893
Enzymes [BR:
phyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
113545893
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
113545893
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
113545893
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
113545893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
SET
zf-met
zf-C2H2_6
Zn-ribbon_8
zf-C2H2_11
zf-C2HC_2
zf_UBZ
zf_PR_Knuckle
Zn_ribbon_SprT
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
113545893
NCBI-ProteinID:
XP_026801345
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MSAAGERQHCCRKSRAPDPAHSQLCEDVKTESLDGGIEVCVKKEEMLELNIYNHGHDFNN
IPEVMSIKEEAADTEDYLYCEVCKSFFFNKCEVHGPALFIPDTPVPLGVADRARQTLPPR
LEIRKSSIPDAGLGVFNMGETVPIGAHFGPYQGELVEREEAMNSSYSWVIYRSRQSEEYI
DAKREMYSNWMRYVNCAYNDEEQNLVAFQYRGGILYRCCRPINPGQELLMWYDEEYPKDQ
GPAFEHLWNKKCSANEVKSTLLQVVSCSLCTLSYTSQIYLDKHMRRCHYEDYVRLHKLRE
IKYETQMPTKCSINQQTFSTLSSNSSHKEMQKEFHHCSDCGKSFTHPSSLQRHQRIHTGE
KPYYCSQCGKSFTEQSALQLHQRIHTGEKPYHCSECGKSFIHPSNLRKHQRIHTGEKPYY
CAQCGKSFTQQSNLQQHQHIHTGEKPYHCSHCGKSFNRQSHLKLHQSIHTGEKPYQCSLC
GKSYNHQNSLRKHQYIHTGEKPYDCSHCGKSFDRQVDLQKHQCIDTAIKTYHCS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagcaggagagagacagcactgctgcagaaagtctcgggctcctgatcctgct
cactcacagctgtgtgaggatgtgaaaacagagtctttagatggagggatagaagtctgt
gtgaagaaagaggagatgctggagctgaacatctacaaccatggacacgacttcaacaac
atacctgaagttatgtccattaaagaggaagcagctgacactgaagactacctctactgt
gaggtttgcaaatccttcttcttcaacaagtgtgaggttcatggtccagcgctcttcatc
cctgatactcctgttcccttgggggttgctgaccgagccagacaaacccttcctcctaga
ctagagattcggaagtctagtattcctgacgcaggtctgggagtgtttaatatgggggag
actgttccaattggtgcacacttcggaccgtaccagggagagctggtagaacgagaggaa
gccatgaacagcagctactcttgggtgatatacaggagcaggcagagtgaagaatatata
gatgccaagagagagatgtattctaactggatgaggtatgtgaattgtgcttataatgat
gaagagcagaatcttgtggcgtttcagtatcgaggggggattctataccgttgttgtcga
cccatcaacccaggacaggagctgttgatgtggtatgatgaggaataccccaaagatcag
ggccctgcatttgagcacctctggaacaaaaagtgttctgcaaatgaagtaaaaagcact
ctgttgcaagttgtctcctgctccttgtgtacactttcctatacatctcaaatttacctc
gacaaacacatgcgaagatgccactacgaggattatgtgagacttcataaattgagagag
ataaaatatgagactcagatgcccacaaaatgctccattaatcagcaaacatttagtact
ctcagttccaacagctctcacaaagaaatgcagaaggaatttcaccactgctcagattgt
ggaaagagttttacgcatccgagttctctacagcgacaccagcgtattcacacaggagag
aagccgtattactgctcacagtgtggaaagagttttactgaacagagtgctctacaacta
caccagcgcattcacacaggagaaaagccttatcactgctcagagtgtgggaagagtttt
attcacccaagtaatctccgaaaacatcagcgtattcacacaggagagaagccatattac
tgcgcacagtgtgggaagagttttacgcagcagagtaatcttcaacaacaccaacatatt
cacacaggagagaagccatatcactgctcacattgtgggaagagttttaatcgccagagt
catctcaaactacaccagagcattcacacaggagagaagccatatcaatgctcactatgt
gggaagagttataatcaccagaatagtcttcgaaaacaccagtacattcacacaggagag
aagccgtatgactgttcacattgtggaaagagttttgatagacaggttgatctccagaaa
catcagtgcattgacactgccataaagacatatcactgctcatag
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