Pangasianodon hypophthalmus (striped catfish): 113547211
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Entry
113547211 CDS
T05759
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00310
Lysine degradation
phyp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
113547211 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113547211 (prdm6)
03036 Chromosome and associated proteins [BR:
phyp03036
]
113547211 (prdm6)
Enzymes [BR:
phyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
113547211 (prdm6)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
113547211 (prdm6)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
113547211 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
113547211
NCBI-ProteinID:
XP_026803288
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MLKPGDQSGSAFLKVDPTYLQHWQQLFPQSQLKNCAIPQIPAPDRAPVAAESLRQRSGLI
SSTSASAALTPSSSSSCAPAVSALAGLTQLSAPQLALFGHSLCTEVAAAENSGASQPKEL
CLQSNFNDKASRLKLTSEELDYYLYGQQRMEIIPLNNHTSDLNNRCDMCADNRNGECPMH
GPLHSLRRLVGTSSAATAAPPPEVPEWLRDLPREVCLCTSTVPGLGYGICASQRIPQGTW
IGPFQGIPLLLDKVQSGAVRNTRHLWEIYDQEGTLQHFIDGNDPSKSSWMRYIRCARHCG
EQNMTVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVIE
AMSRQESLQPFSKTSKSSTTVMLQRSMVFPHSPCSRSFSLLDKVGNMESGFSQLNTKNQR
VLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFAQ
PSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQL
SRHQRMPNECKPISESSESIEVD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggggatcagagcggttctgctttccttaaagtggatccgacttacctt
cagcactggcagcagcttttcccgcagagtcagctgaagaactgcgcaattccgcaaatc
ccggcgcccgatcgagcgcctgtagcagcggagagcctgcgccagagaagcgggttaatc
tcctccaccagcgcctcggccgctttaacgccgtcctcgagctcgtcttgcgctcctgcc
gtgtccgcgctcgcgggcttaacgcagctctccgcgccgcagctcgcgctgttcggacac
tctctctgtacagaggtcgcagcggcggaaaacagcggcgcgtctcagcccaaggaactt
tgcctgcagtccaactttaacgacaaagcgtcccggttgaagctgacctcagaggaactg
gactactatctatacggacagcagaggatggagattatcccactgaacaatcacaccagt
gatctcaataaccgctgtgacatgtgtgcagataaccggaacggcgagtgccccatgcac
gggcccctgcactcgctgcggcgcctggtagggacaagcagtgcagccactgctgcgccc
cctccagaggttcccgagtggctgcgtgacctgccccgcgaagtctgcctctgcaccagc
acagtgccaggcctgggctatggtatctgtgcttcccagcgcataccacagggcacttgg
attggaccttttcagggtattcctctgctgctggataaggtgcagtcaggagcggtgcgc
aacacaagacacttatgggagatctatgaccaggagggcacgttacagcactttattgat
ggcaatgatccaagcaagtcaagctggatgaggtacatccgctgtgccagacactgtggg
gaacagaacatgacagtggttcagtacagatcatgtattttctaccgggcttgtatggat
attccacgaggaacagagcttctggtctggtacaatgacagttacacctccttctttggc
atccccctgcagtgcatcgcacaggatgaaaacttgaatgtgccatctactgtaatcgag
gccatgtcccgacaagaaagcctgcagcctttcagcaaaacatccaaatcctctacaact
gtcatgctgcagcgctccatggttttccctcactcaccctgctcacggagcttctctctg
ctggacaaggtgggcaacatggagtctggctttagccagctgaacaccaagaaccagcgg
gttctagccagtcccacatccaccagccagcttaacagtgagttcagcgactggcacctc
tggaagtgtggccagtgcttcaagaccttcacacaacgcattcttctgcaaatgcatgtg
tgcacacagaatccagacagaccatatcagtgtggacactgttcacagtcctttgcccag
ccctcagagctgcgcaaccacgtggtaacacattccagtgaccggcccttcaagtgtggc
tattgcggccgtgctttcgccggagccacgacgctcaacaaccacatccgcacccacacc
ggggagaagccattcaagtgtgagcggtgcgagaggagcttcacgcaggccacacagctt
agcagacaccagcggatgcccaacgagtgcaaacccatcagcgagagcagcgaatcaatt
gaggtggattag
DBGET
integrated database retrieval system
