Paenibacillus ihbetae: BBD41_05980
Help
Entry
BBD41_05980 CDS
T05154
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pib
Paenibacillus ihbetae
Pathway
pib00730
Thiamine metabolism
pib01100
Metabolic pathways
pib01240
Biosynthesis of cofactors
pib04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pib00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BBD41_05980
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BBD41_05980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pib03016
]
BBD41_05980
Enzymes [BR:
pib01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
BBD41_05980
Transfer RNA biogenesis [BR:
pib03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
BBD41_05980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Motif
Other DBs
NCBI-ProteinID:
ANY72174
UniProt:
A0A1B2DWR6
LinkDB
All DBs
Position
complement(1305247..1306485)
Genome browser
AA seq
412 aa
AA seq
DB search
MTYDMLLLRFGEFTLKGKNRSRFERSVHNHIKSVLRPFPNANIIKEYGRLYVELNGESPE
ALAGALKKVFGLVSISPVRVCPSELDSIIKTAVEFVGQKELTKETTFKVTARRVWKPFPH
SSQEMNHLVGSPLLRVYPQLKVQVKNPEIELRIEIRQERTYLFYEVIPGVGGFPLGTNGK
AMLLLSGGIDSPVAGWEAMRRGLEIQCVHFYSYPYTSQLAKEKVMELTRILSGYAGRLKL
HLVPFTDVQTSFVGIGQDNLIITLMRRAMLRIATTLAEKEGALAIVTGDSLGQVASQTLA
SMNVIGRATDLPILRPLVTSDKNEIIRTAIDIGTYETSILPYEDCCTLFVPKSPTTNPNL
HVVERVEASLEQLAARIEAAVAGTETLIIKPDTNIGASSPNDEEPVVNEDWF
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgacttatgatatgctgctgcttcgcttcggcgaatttacgttaaaaggaaaaaaccgc
agccggttcgagagatcggtgcataaccatatcaagagcgtgctgcggccgttccctaac
gcgaacatcataaaggaatacggaagattgtatgtggaactgaacggggagtctcccgag
gcgctggcgggtgcgttgaagaaggtattcggccttgtatcgatcagccccgtccgagta
tgcccctccgagctggacagcattatcaagaccgctgttgaatttgtagggcagaaggaa
ttgacgaaggaaacaacctttaaagtgaccgccagacgggtgtggaagccgttcccccac
tcctcccaggagatgaaccatctggtcggctcgccgctgctgcgggtctatccccagttg
aaggtacaggtgaaaaatccggagatcgagctccggatcgagatccgtcaagaaagaacc
tatctgttctatgaggtgatccccggtgtcggcggatttcctctcggaacgaacgggaaa
gccatgctgctcttgtccggcgggatcgacagcccggtagcgggctgggaggcgatgcgg
cgaggacttgaaattcagtgcgttcatttttacagctacccttacacaagccaactcgcc
aaagagaaggttatggaattaacccggattttatcggggtatgccggcaggctgaagctg
catctcgttccatttacggatgtgcagacgtcctttgtcgggatcgggcaggataatctg
attatcaccctcatgcgcagggcaatgctgagaatagcgaccacccttgccgagaaggag
ggggcgctggcgattgttaccggcgacagcctgggccaggtagcgagccagacgctggcg
agcatgaacgtcatcggccgggccactgacctgccgattctgcgtccgctcgttacatcc
gataagaatgagattatccggacggcgattgatatcggcacatatgaaacgtccattctt
ccctatgaggattgctgcacgctgtttgttcccaaatccccgacaacgaatccgaacctg
catgtcgtggagagagtggaggcttcgttggagcagctggctgcacggattgaggcagcc
gtagccggaaccgaaacgctgatcattaaacctgacacgaacatcggcgcaagctccccg
aacgatgaggagccagttgttaacgaggactggttctag
DBGET
integrated database retrieval system
