Paenibacillus ihbetae: BBD41_13605
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Entry
BBD41_13605 CDS
T05154
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pib
Paenibacillus ihbetae
Pathway
pib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBD41_13605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pib03021
]
BBD41_13605
03400 DNA repair and recombination proteins [BR:
pib03400
]
BBD41_13605
Transcription machinery [BR:
pib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBD41_13605
DNA repair and recombination proteins [BR:
pib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBD41_13605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
Mnd1
Motif
Other DBs
NCBI-ProteinID:
ANY73525
UniProt:
A0A1B2E0N9
LinkDB
All DBs
Position
complement(3067330..3067887)
Genome browser
AA seq
185 aa
AA seq
DB search
MSNPLNLKIDPEKIQEIPMVDLAFMVLKAANTPYYYRDLMNEVAKLRGFTEEEINETIAQ
LYTEINIDGRFACVGTNLWGLKRWYPLERSEDPIANAKRPRIINDEDDDDDDFTDEEDTY
SVDDVEDDYDSLDDEDDDLFAEDDDADADVDDDVVIDDDDLDDEDAEAEEEENLDGEEFE
EDDLD
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaatccgctcaatttaaagatcgatccggagaagatccaggaaatcccgatggtt
gacctggcttttatggttctgaaggcggccaatacgccgtattattaccgtgacctgatg
aatgaggtggccaagcttcgcggctttacggaagaagagattaacgaaacgattgcccag
ttatataccgagatcaatatagacggacgtttcgcttgcgtcggaacgaatctgtgggga
ttgaagcgctggtaccctctggagcgctccgaggatccgattgcgaacgccaagcgtcct
cgcatcatcaatgacgaagacgatgacgacgatgatttcaccgatgaagaggatacgtac
agcgtggatgacgtcgaagacgattacgacagcctggatgacgaggatgacgatctcttc
gccgaggacgacgatgctgacgctgacgttgacgacgatgtcgtgatcgatgacgacgat
ttggacgatgaggatgccgaagccgaggaagaagagaatctggatggcgaggaattcgaa
gaggacgatctggattaa
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