Scheffersomyces stipitis: PICST_34146 Help Entry PICST_34146       CDS       T01023                                  Symbol RPB140 Name (RefSeq) DNA-dependent RNA polymerase II   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism pic  Scheffersomyces stipitis Pathway pic03020   RNA polymerase pic03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pic00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     PICST_34146 (RPB140)   09124 Replication and repair    03420 Nucleotide excision repair     PICST_34146 (RPB140)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pic03021]     PICST_34146 (RPB140)    03400 DNA repair and recombination proteins [BR:pic03400]     PICST_34146 (RPB140) Enzymes [BR:pic01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      PICST_34146 (RPB140) Transcription machinery [BR:pic03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      PICST_34146 (RPB140) DNA repair and recombination proteins [BR:pic03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       PICST_34146 (RPB140) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 RNA_pol_Rpb2_3 MRNIP Motif Other DBs NCBI-GeneID:  4851014 NCBI-ProteinID:  XP_001387366 JGI:  34146 UniProt:  A3GFG5 LinkDB All DBs Position 1:714755..718453 Genome browser AA seq 1232 aa AA seqDB search MDSQDDPYLYDDGDAQSITPEDCWTVISSFFQEKGLVSQQLDSFDEFIETTIQELVWEDS HLILDQPAQHTSEDDHENRRYEITFGKIYISKPMQTEGDGTTHPMFPQEARLRNLTYSSP LYVDMTKKVFKSDDNRRKENELEWVEEKVEDEEPQQKVFLGKVPIMLRSKFCMLRDLGEH EFFELKECPYDMGGYFVINGSEKVLIAQERSAANIVQVFKKAAPSPISHVAEIRSALEKG SRLISSMQIKLYGRDEKGTSGRTIKATLPYIKEDIPIVIVFRALGVVPDGDILEHICYDA NDWQMLEMLKPCVEEGFVIQEREVALDFIGRRGVLGIRREKRIQYAKDILQKELLPNITQ EEGFESRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLANLFRILFRKLTK DIYNYMQRCVENDKEFNLTLAVKSQTITDGLRYSLATGNWGEQKKAMSSRAGVSQVLNRY TYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMTCIS VGTPSEPILYFLEEWGMEPLEDYVPSNSPDSTRVFVNGVWVGTHRDPANLVDTMRSLRRR GDISPEVSIIRDIREKEFKIFTDAGRVYRPLFIVDDEAESETKGDLKLQKEHVHNLLSSE YDEYEDPDNEGASYTWSSLINDGVVEYVDAEEEETIMIAMTPEDLEASKNAITETPDKSV LEEQELDPAKRIKPTFSAATHTFTHCEIHPSMILGVAASIIPFPDHNQSPRNTYQSAMGK QAMGVFLTNYSVRMDTMANILYYPQKPLATTRAMEHLKFRELPAGQNAIVAIACYSGYNQ EDSVIMNQSSIDRGLFRSLFFRTYMDLEKRQGMKALETFEKPSRSDTLRLKHGTYEKLDD DGLIAPGVRVSGEDIIIGKTTPIPPDTEELGQRTQYHTKRDASTPLRSTESGIVDQVLLT TNGDGAKFVKVRMRTTKIPQIGDKFASRHGQKGTIGVTYRHEDMPFTAQGIVPDLIINPH AIPSRMTVAHLIECLLSKVSSLSGLEGDASPFTDVTAEAVSKLLREHGYQSRGFEVMYNG HTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMER DCMIAHGAAGFLKERLMEASDAFRVHVCGMCGLMTVIANLKKNQFECRSCKNKTNIYQIH IPYAAKLLFQELMAMNISPRMYTERSQNSIRV NT seq 3699 nt NT seq  +upstreamnt  +downstreamnt atggactcccaagacgatccctatttgtacgacgacggcgatgcccagagcattacgccc gaagactgctggacggtgatcctgtctttttttcaggaaaaaggtttggtctcccagcag ttggactcgtttgacgagttcatcgagacaaccatccaggagttggtgtgggaggattcg catttgattctcgaccagccagctcaacatacttccgaagatgaccacgagaacagacgt tacgaaatcacatttggcaagatctacatctctaagcctatgcagacagaaggcgatggt accactcatcccatgttccctcaagaagcccgtttgagaaacttaacttactcctcacct ttgtatgtagacatgaccaaaaaggtgttcaagtccgatgacaacagacggaaggaaaac gagttggaatgggtagaagaaaaggtagaagatgaagaacctcaacaaaaggtctttttg ggtaaagtacccatcatgttgcggtccaagttctgtatgttgcgtgatttaggtgaacac gagttcttcgagttgaaagagtgcccttacgatatgggaggctactttgtcatcaacggt tcggaaaaggtgttgattgcccaagagagaagtgctgcaaatattgttcaagtattcaag aaggctgctccttctcctatttctcatgttgcagaaataagactggctcttgaaaagggt tcgcgtttgatttcgtcgatgcaaatcaaattgtacggtagagacgaaaagggaacgtct ggtagaacgatcaaggctacattgccttacatcaaggaagacattcctatcgtaatcgta ttcagagcgttgggtgtagtccccgacggagacatcttagaacacatctgttacgatgct aatgattggcagatgttggagatgttgaaaccctgtgtggaagaagggtttgtaattcaa gaaagagaagtcgctcttgatttcattggtagaagaggtgttttaggtatcagaagagaa aaacgtatccagtatgctaaggatatcttgcagaaagagttgttgcctaatatcacacag gaagagggctttgagtctagaaaggcattcttcttaggttacatggtcaacagattgttg ttgtgtgcattggaaagaaaggagccagacgacagagaccactttggtaaaaagagattg gatttagctggacccttattggccaacttgttccgtattctcttcagaaagttaaccaaa gatatatacaactacatgcagagatgcgtagaaaacgacaaagaattcaatttgacgttg gccgtcaagtcccaaaccataaccgatggtttacgttactctttggctacaggtaactgg ggtgaacagaagaaggccatgtcgtcccgtgctggtgtatctcaagttttgaatcgttac acatactcatctaccttgtcacatttgagaagaacaaatactcctattggacgtgatggt aagatcgccaagcccagacagttgcataacactcactggggattagtatgtccagcagaa acgcctgaaggacaggcgtgtgggttggttaagaacttgtctttaatgacatgtatttca gttggtacaccttctgagcctatcttatactttttggaagaatggggtatggagcctttg gaggattatgttccttctaattctcctgactcgaccagagtgttcgtaaacggtgtttgg gttggtactcacagagatccagccaacttggttgataccatgcgtagtttaagaagacga ggtgatatatctcctgaagtttctattatcagggacatcagagaaaaagagtttaagatc ttcaccgatgctggacgtgtttaccgtccgttgttcattgtagacgacgaggccgagtcc gaaaccaaaggtgacttgaagttgcagaaggagcatgtccacaacttgttgtcgtctgaa tacgacgagtacgaagacccagacaacgaaggagccagttacacctggctgtcattgatt aatgatggtgttgtagagtatgtagatgctgaagaagaagaaaccattatgatagccatg acaccagaggacttggaagcttccaagaatgctattactgaaactccagataagtctgtg ctcgaagagcaagagttagacccagccaagagaatcaagcctactttctcagctgccaca catacattcacccattgtgagatccatccatctatgattttgggagtggcagcttcgatt atcccctttccagatcataaccaatcgcctcgtaatacctatcaatctgctatgggtaag caagccatgggtgtctttttgactaactactctgtgagaatggatactatggccaacatc ttgtactatccacagaaacctctagctaccactagagccatggagcacttgaagtttaga gagttgcctgctgggcaaaacgccattgttgccattgcttgttactccggttacaatcaa gaagattcagtgattatgaaccaatcatccatcgacagagggttattcagatcattgttc tttagaacgtatatggatttggaaaagaggcagggtatgaaggcattggaaacatttgaa aagccttctcgttcggatacattaaggcttaagcacggaacctacgagaagttggatgac gatgggttgattgctcctggtgtcagagtcagtggtgaggacatcataattggtaagact acacctattcctccagacactgaggagttgggacaaagaacacaataccataccaagaga gatgcttccacgcctttgagaagtaccgagtctggtatcgtcgatcaggtgttgttaacc acgaatggtgatggtgcaaagtttgtcaaggtgagaatgagaacaaccaagattcctcag atcggtgacaagtttgcttccagacacggacagaagggtactattggtgttacctataga cacgaagatatgccgttcacagcccaggggattgttcccgatcttattatcaacccccat gccattccctctcgtatgacggttgcgcatttgattgaatgtttgctttcgaaggtgtcg tcattgtctgggctcgaaggtgatgcttctccctttaccgatgtcactgctgaggctgta tccaagttgttgagagaacacggctaccaatcgagaggtttcgaagtcatgtacaacggt cacactggtaagaagttgatggcacaagtattctttggacctacgtactaccagagattg agacacatggtcgatgacaagatccacgccagagccagaggaccagttcaagtccttacc agacaaccagtagaaggtagatcgagagatggtggtttacgtttcggtgaaatggaaaga gattgtatgattgcccatggagctgctggattcttgaaggaaagattgatggaggcatct gatgccttcagagtccatgtctgtggtatgtgtggtttgatgacggttattgccaatttg aagaagaaccaattcgagtgtcgttcgtgcaagaacaagaccaacatctaccagattcat attccatatgctgccaagttgttgttccaggagttgatggcaatgaatatttctccaaga atgtataccgaaagatcacagaacagcattagagtttga

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