Scheffersomyces stipitis: PICST_54142
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Entry
PICST_54142 CDS
T01023
Symbol
KIN28
Name
(RefSeq) serine-threonine kinase, subunit of RNA Pol TFIIK
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic03022
Basal transcription factors
pic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PICST_54142 (KIN28)
09124 Replication and repair
03420 Nucleotide excision repair
PICST_54142 (KIN28)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pic01001
]
PICST_54142 (KIN28)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_54142 (KIN28)
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_54142 (KIN28)
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_54142 (KIN28)
Enzymes [BR:
pic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
PICST_54142 (KIN28)
2.7.11.23 [RNA-polymerase]-subunit kinase
PICST_54142 (KIN28)
Protein kinases [BR:
pic01001
]
Serine/threonine kinases: CMGC group
CDK family
PICST_54142 (KIN28)
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PICST_54142 (KIN28)
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
PICST_54142 (KIN28)
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PICST_54142 (KIN28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
APH
Motif
Other DBs
NCBI-GeneID:
4837121
NCBI-ProteinID:
XP_001382915
JGI:
54142
UniProt:
A3LNM7
LinkDB
All DBs
Position
2:complement(763308..764324)
Genome browser
AA seq
338 aa
AA seq
DB search
MATTSTTTAKTVPDSIVQNKYSKDRKVGEGTYAVVYLGNQVSTKRRIAIKEIKTGIFKDG
LDMSAIREVKYLQELKHPNVIELVDVFSTTNNLNLVLEFLPCDLEVLIKDTSIVFKSSDI
KSWLLMTLRGIHHCHRNFILHRDLKPNNLLLAPDGQLKIADFGLARSLGNPNEDLSSNVV
TRWYRSPELLFGARHYTGAVDIWSIGIIFAELMLRTPYLPGKDDVDQLDVTFRALGTPTE
QIWPNVSSLPMYNALRVYPPPSRQELRNRFSAATEKALDLLISMTQLDPSRRCDSTQALL
HEFFTENPRPTEPENLPKKKEKVKSEDELDESNKRRKI
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggctactactagtactaccactgcaaagacagtgcctgactccattgtccagaacaaa
tactcaaaggataggaaggttggtgaaggtacctatgctgttgtgtatcttggtaaccag
gtctccactaagagaagaatagctatcaaagagatcaagacaggaatattcaaggatggg
ttggatatgtcggctatacgagaggttaaatatcttcaagaactcaagcaccccaatgtt
attgaattggtggatgttttttctaccactaataacttgaacttggttctagaattttta
ccttgtgatttggaagtgcttatcaaagataccagtatagtgttcaagtcgtctgacatc
aagtcgtggttgttaatgactttacgaggtattcaccactgtcatagaaacttcattttg
catcgggatttaaaacccaacaatttgcttcttgctccagatggccaattaaagatagct
gattttggtttggcgcgatctttgggaaatccaaatgaggatctttcttcaaatgtagta
accagatggtataggtctcccgagttgttatttggtgctaggcattataccggagctgta
gatatctggtccatagggataatctttgcagagttaatgttgagaacgccgtacttgcct
ggaaaagatgatgtagaccagttggatgtgacgttcagagctttggggacaccaaccgag
cagatatggcccaacgtttcaagtttacccatgtacaatgcgttgagagtatatcctcct
ccttcaagacaagagttgagaaacagattcagtgctgctacagaaaaggcattggactta
ttgatctccatgacacagttggatcccagtagaagatgtgatctgacccaagcgctattg
catgaattctttactgagaatcccagacccacagagccagaaaaccttcctaagaagaaa
gagaaagtaaaaagtgaagacgagttggatgaatctaataaaagaagaaaaatataa
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