KEGG   Scheffersomyces stipitis: PICST_58607
Entry
PICST_58607       CDS       T01023                                 
Symbol
RPB4
Name
(RefSeq) RNA polymerase II fourth largest subunit
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pic  Scheffersomyces stipitis
Pathway
pic03020  RNA polymerase
pic03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PICST_58607 (RPB4)
  09124 Replication and repair
   03420 Nucleotide excision repair
    PICST_58607 (RPB4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pic03021]
    PICST_58607 (RPB4)
   03400 DNA repair and recombination proteins [BR:pic03400]
    PICST_58607 (RPB4)
Transcription machinery [BR:pic03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PICST_58607 (RPB4)
DNA repair and recombination proteins [BR:pic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PICST_58607 (RPB4)
SSDB
Motif
Pfam: RNA_pol_Rpb4 NPA GCV_T
Other DBs
NCBI-GeneID: 4838739
NCBI-ProteinID: XP_001384230
JGI: 58607
UniProt: A3LU87
LinkDB
Position
4:1417284..1417856
AA seq 190 aa
MNVSTSALGVRRRKAATQNIDDEENAALLKLGPEFQLTQITNSGEQEQLIALNLSEARLL
IRAALKERRNKNAKKTEYDEDDENDKEDEISNMDLAGPNSNEIMHKTLNYLTNFARFKNS
SSTETVEKLLNDFSLSASEPLHPFELAQLGTLECEDAEEAKSLIPSLIHKVSDVQLQTLL
TELRKYQTLS
NT seq 573 nt   +upstreamnt  +downstreamnt
atgaatgtcagcacaagtgccttgggtgtcagaagaagaaaggctgccacccaaaatata
gatgatgaagaaaatgccgcattattgaaattgggccccgaattccaactcacgcagatt
acaaacagtggagaacaagaacagttgattgcccttaacttgtcagaggccagattgttg
ataagagcagccttaaaggaacgtagaaacaaaaatgcaaagaagacagagtacgacgaa
gacgacgaaaatgataaagaggatgagatttctaacatggatttggcgggccccaactcc
aacgaaatcatgcacaagacgttgaactatttaaccaatttcgccagattcaagaattct
tcctccacggaaactgtagaaaagttgttaaacgacttcagccttctggcctccgagcct
ttgcatcctttcgagttggcccagttgggtacattagagtgtgaagatgccgaggaagcc
aagtcgttgattcccagtcttatccacaaggtgtctgacgtacagttgcaaactttgctt
accgagctcagaaagtaccagaccttgtcatag

DBGET integrated database retrieval system