Scheffersomyces stipitis: PICST_66237
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Entry
PICST_66237 CDS
T01023
Symbol
RPO31
Name
(RefSeq) DNA-directed RNA polymerase III subunit C1 (RPO31)
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PICST_66237 (RPO31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_66237 (RPO31)
Enzymes [BR:
pic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PICST_66237 (RPO31)
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
PICST_66237 (RPO31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
4850832
NCBI-ProteinID:
XP_001387687
JGI:
66237
UniProt:
A3GEY3
LinkDB
All DBs
Position
1:complement(182390..186787)
Genome browser
AA seq
1448 aa
AA seq
DB search
MKEVVVDIAPKCIKGLEFSALSAKDIVAQSEVEVQTRDLYDLEKGRTPKVAGALDTRMGI
SSNSNECATCHGNLASCHGHFGHIRLALPVFHVGYFKSIIQVLQCICKNCSAVLLDENTK
RQFISDLRRPNIDNLRRMKILKKVLDQCKKQRRCLKCNHVNGVVKKAASGAGPAALKIVH
DTFRWIGKKPTPEKEYWDKEFDQVLSRNPELEKFAKRVYDDLNPLKTLNLFKQITPSDCE
LFGLDPARGGRPEMYIWRYLPAPPVCIRPSVMMDSQSNEDDLTVKLTEIVWTSSLIKAGI
EKGISINNLMEQWDYLQLSVAMYINSDSANPALLPSSGGGGSKSSKPIRGFCQRLKGKQG
RFRGNLSGKRVDFSGRTVISPDPNLKIDEVAVPELVAKVLTYPERCTRYNRKKLQRLVVN
GPDIHPGANYVMKQNEQAKRNLRFGDRVKLAKNLQIGDLVERHIEDGDVVLFNRQPSLHR
LSILSHYAKIRPWRTFRLNECVCTPYNADFDGDEMNLHVPQTEEARAEAINLMGVKNNLL
TPKSGEPIIAATQDFITGSYLISHKDSFFDRASLVQLLSMMSDADVQFDIPPPSIFKPVM
LWTGKQVFSLLIKPNKKSNVVINLDAKCKTFIPPEKGLPSEMSPNDGFVIIRGSQVLAGV
MDKSLLGDGKKHSVFYTILRDYGPEEAATAMNRMAKLCARFLGNRGFSIGINDVTPGFDL
RRKKELMVEQAYLKCDELIDLYHRGKLETQPGCNEEQTLEAKISGLLSKVREEVGEVCIR
ELDSLNAPLIMATCGSKGSTLNVSQMVAVVGQQIISGNRVPDGFQDRSLPHFTKNSKTPQ
SKGFVRNSFYSGLTPPEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSSQYDST
VRNSSNGIVQFTYGGDGLDPYDMEGDARPVNFKRQWDHAFNITFNIKDKSLLPYEIIDLV
NSILEPLEDRLIRYDNVGKILPEEDFDKIEYIDQNDAERAYYQSLRDFVTDKAEQLAQIR
EHRGLRTFFTRPDSEDILFDSDESAVNAVDQLLKISSKTIEKFLEQSLYKYSKAKVEPGT
AVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKTISTPIINSVLVN
DDDEIAARVVKGRVEKTLLKDVAFFIEDVYKNEMAYLSIKIDMSTIEKLQLELTIDDIVT
AIHNAPKLKISPGDVSVSGKDRVNVLATLRESKADALKNGSNANELFFRMQQLRRSLPNI
CIKGLPNIMRAVINIRDDGKKELLVEGYGLKDVMSTDGIVGTKTTTNHVLEVFEVLGIEA
ARASIIKEIDYTMSNHGMSVDPRHIQLLGDVMTYKGEVLGITRFGLSKMRDSVLQLASFE
KTTDHLFDAAFFMKSDKIEGVSECIILGQSMSIGTGSFKLVKSSNYDKKVLKMKPTLFEG
LCEVASTA
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagtggtagtcgacatcgcgcccaagtgtatcaaggggctcgagttctccgct
ctttcggccaaagacattgtggcccagagtgaggtagaggtgcaaacacgagatctctat
gatttagaaaagggaagaactcctaaagtagctggggcactcgatacgagaatggggata
tcgctgaatctgaacgaatgtgcaacttgtcatggaaatttggcttcgtgccatgggcat
ttcggccatatacgattggcgttgccggtttttcatgtaggctacttcaagctgattatc
caagttttgcaatgtatctgtaagaattgttcagctgtgttgttagacgaaaacaccaag
agacagtttatttccgatttgcgccgtcccaacatcgacaacttgcgtagaatgaagatt
ttgaagaaggtcttggaccagtgtaagaaacaaagaaggtgtctcaaatgtaaccatgtc
aatggtgtagtcaagaaggctgccagtggtgctgggcctgctgccttgaaaatcgtacac
gacactttccgttggatcggaaagaagccaacacccgaaaaagaatactgggataaggaa
ttcgaccaggtgttgctgagaaaccccgaacttgagaagttcgctaaaagagtctatgat
gacttgaatcctctaaaaacgcttaatttattcaagcagataaccccctcagactgtgaa
ttgtttggcttggatccagccagaggaggaagaccagaaatgtacatttggcgttactta
ccagctcccccagtgtgtatcagaccttcagtcatgatggatagccagtccaacgaagat
gatctcacagtcaagttaacagaaatcgtgtggacttcgtctttgatcaaggccgggatc
gaaaagggtatttctatcaataacttgatggagcaatgggactacttgcagttgtctgta
gccatgtatatcaactctgactctgccaaccctgcacttttaccttcttcaggtggtgga
ggctccaagtcttccaagcctatccgtggtttctgccagagactaaaggggaagcaggga
cgtttcagaggaaatttatccggaaaaagagtcgatttctccggtagaacagtcatttct
ccagatcctaatcttaagattgatgaagttgccgtaccggaattagttgcaaaagtgttg
acataccccgagagatgtaccagatataacaggaagaagcttcagagattagtagtcaac
ggtcccgatatccatcctggtgccaactatgtcatgaagcagaacgagcaggcaaagaga
aacttgcgatttggtgacagagtgaaattggccaaaaacttacaaataggcgatctagta
gaaagacatatcgaggacggagatgtggtattgttcaacagacagccttctttacataga
ctttccatcttgtcgcactatgccaaaatcagaccctggagaacattcagattgaacgaa
tgtgtttgtactccgtataatgcggatttcgatggtgacgaaatgaacttacacgtgcca
caaacagaggaagctcgtgctgaagccatcaacttaatgggggtcaaaaataatcttttg
actcccaagtccggtgaaccgatcattgctgctacccaggattttatcactggttcatac
ttgatttcgcacaaggattcgttctttgatcgagcctcgttggttcagctcttgagtatg
atgtcggatgctgatgtacagtttgacattccgcctccatcaatcttcaagccagtaatg
ctctggaccggtaagcaggtattctcgttgttgatcaaaccaaacaaaaagtctaatgtt
gtcatcaacttggacgctaaatgcaaaactttcattcctccggaaaaaggattgccaagc
gaaatgtcaccaaatgatggttttgtcattatcagaggttcccaggttttggctggtgtc
atggacaagtcgttattgggagatggtaagaagcattccgttttctatactatcttgaga
gactatggccctgaagaagcagctaccgccatgaacagaatggccaagttgtgtgccaga
ttcttgggtaaccgtggtttttcgattggtatcaacgatgtcactcctggctttgacttg
cgaagaaagaaagaattaatggtagaacaggcttacttgaagtgtgacgaattgattgac
ttgtatcacagaggtaagttagaaactcaacctggttgtaatgaggaacagactttggaa
gctaagatttccggtttgctttcgaaggttagagaagaagtaggtgaagtgtgtattaga
gagcttgactcgttgaatgctccactcattatggccacttgcggttccaagggttccact
ttgaacgtgtcacagatggttgcagttgtcgggcaacagattatttctggtaatcgtgtt
cctgatgggttccaagatagatctttgcctcacttcacgaagaactccaagactcctcag
tctaaggggtttgtgagaaattcattctacagtggcttgacaccaccggagttccttttt
cacgccatttctggtagagaagggttagttgatactgctgtcaagactgctgaaactggg
tacatgtcaagaagattgatgaagtcattggaagatttgtcttcgcagtacgattctaca
gttagaaactcctcaaatggtattgtacaattcacatacggtggagacggtttggatcca
tacgacatggaaggggatgccagaccggtcaacttcaaacgtcaatgggaccacgccttc
aacattaccttcaacatcaaagataagagcctccttccttacgaaatcatcgatttggtg
aattccatccttgaacctttggaagacagattaatcagatatgacaacgtaggcaaaata
ttgccagaagaagatttcgacaagatagagtacattgaccagaacgatgctgaaagagct
tactaccagtcgcttcgcgatttcgttactgacaaggccgaacaacttgcccagattaga
gagcatagaggattgcgtacattcttcacaagaccagacagtgaagatatactctttgat
tctgacgaatctgcagttaatgctgtagatcaacttctcaaaatttcttccaaaaccatt
gagaagttcttggagcaatctctctacaaatattccaaggccaaggttgagccaggtact
gctgttggtgctataggtgcacagtctattggagaacctggtactcagatgacgttgaag
actttccatttcgctggtgttgcctctatgaatgtcactttgggtgttccccgtattaag
gaaattatcaatgcctccaagacgatttccacacctatcatcaactccgttttggtcaac
gatgacgacgagatcgcagcccgtgtggtaaagggtagagtcgagaaaacgttgttgaag
gatgttgcgttcttcatcgaagatgtatacaagaacgaaatggcctacttgtctatcaag
atcgacatgagcactattgaaaagttgcagctcgagttgacgatcgacgacatcgtcaca
gccatacacaatgcccctaagttgaaaatctcacctggagatgtctcagtttctggaaaa
gacagagtcaacgtgttggcaacgttgagagaaagcaaggcagatgccttgaagaatggt
tccaacgcaaacgagttgttcttcagaatgcaacaactcagaagatcgttacccaacatc
tgcatcaaagggttgcccaacatcatgcgtgctgttatcaacattcgtgatgacggcaag
aaggaattgttggttgaaggctatggcttgaaggatgttatgagtaccgacggtattgta
ggcaccaagactaccaccaaccatgttcttgaggtgtttgaagtgttgggaattgaagct
gctagagcatccatcatcaaggaaattgactacaccatgagtaatcacgggatgagtgtc
gatcctcgtcacatccagcttttgggtgatgtgatgacttacaagggcgaagtattgggt
atcaccagattcggcttgagtaagatgagagattcggtgttacaattggcatctttcgaa
aagaccaccgaccacttgtttgatgcagccttcttcatgaagagcgacaagatcgaaggt
gtttctgaatgtattatattggggcaaagcatgagcatagggactggttcgttcaaattg
gtcaagtcgtccaactacgacaaaaaggttttgaaaatgaagcccaccctattcgaggga
ttgtgtgaagtggcttccactgcataa
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integrated database retrieval system
