Pseudomonas iranensis: HU724_005055
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Entry
HU724_005055 CDS
T07894
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
pie
Pseudomonas iranensis
Pathway
pie00053
Ascorbate and aldarate metabolism
pie01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
HU724_005055 (garD)
Enzymes [BR:
pie01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
HU724_005055 (garD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
QXI23642
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All DBs
Position
1162422..1163975
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AA seq
517 aa
AA seq
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MQLIEHSDSPRYIRLHERDNVVVVVNDQGVPAGTEFADGLVTLDFVPQSHKVTLEDIPEG
GPVIRYGQIIGYALQPIRRGSWVKEDQLRMPTAPPLDSLPLSTDVPDAQAPLEGFTFEGY
RNADGTVGTRNILGITTTVQCVTGVLDHAVKRIKEELLPKYPHVDDVVALTHSYGCGVAI
TATDAYIPIRTVRNLARNPNLGGEALVIGLGCEKLQAGQVMHEDDASVDLSDPWLYRLQD
SSHGFTEMIEQIMELAEVRLKKLDQRRRETVPASELILGMQCGGSDAFSGITANPALGYA
SDLLLRAGATVMFSEVTEVRDAIYLLTSRAQTQTVAEELVREMDWYDRYLAKGEADRSAN
TTPGNKKGGLSNIVEKSLGSIVKSGSSAINGVLGPGERFKHKGLIFCATPASDFVCGTLQ
LAAGMNLHVFTTGRGTPYGLAMAPVVKVSTRTELAQRWPDLIDIDAGRIATGRATIEELG
WELFHYYLDVASGKQQTWAEKHKLHNDITLFNPAPIT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgattgaacattccgactcgccgcgctacatccgcctgcacgagcgggacaac
gttgtagtggtggtcaacgatcagggcgtaccggccggtaccgagttcgccgacggcctg
gtcaccttggatttcgtaccgcagagccacaaggtcaccctggaggatattcccgaaggc
ggcccggtgattcgttacgggcagatcattggttacgcgttgcagccaatccgacgcggc
agttgggtcaaggaagatcaactgcgcatgccgaccgcgccgccgctggacagcttgccg
ctgtccaccgatgtgccggatgcgcaggcaccgctggaaggcttcacgttcgaggggtat
cgcaacgccgacggcaccgtcggcacgcgcaacattctcggcatcaccaccaccgtgcag
tgcgtcaccggcgtgcttgatcatgcggtcaagcgcatcaaggaagagctgctgccgaag
tacccgcacgtcgatgacgtggtggcgctgacccacagctatggctgcggtgtggcgatt
accgccaccgacgcctacatcccgattcgtaccgtgcgcaatctggcgcgcaacccgaac
ctgggtggcgaggcgctggtgatcggtctgggctgcgagaaattgcaggccgggcaagtg
atgcacgaggacgatgcctctgtggatctcagcgatccgtggctgtaccgcttgcaggat
tccagtcatggctttaccgaaatgatcgaacagatcatggaactggccgaagtgcgcttg
aagaaactcgaccagcgccgccgcgaaaccgtgccggcctccgagctgattctcggtatg
cagtgcggcggcagcgatgcgttctccggcatcaccgccaacccggcgctgggttatgcc
tcggacttgctgctgcgagcgggggcgacggtgatgttttccgaagtcaccgaagtgcgc
gatgcgatctacctgctgacctcacgggcgcaaacgcaaaccgtcgccgaagagctggtg
cgcgagatggactggtacgaccgttacctggccaagggcgaagccgatcgcagcgccaac
accacgccgggcaacaagaagggcgggttgtcgaacattgtcgagaagtccttgggctcg
atcgtcaagtccggcagcagcgcgatcaatggcgtgctcggcccgggcgagcgtttcaag
cacaagggcctgattttctgcgcgacgccggcgagtgattttgtctgcggtacgctgcaa
ctggcggcggggatgaacctgcacgtgttcaccaccggtcgcggcacgccttacgggctg
gccatggcgccggtggtcaaggtatcgacgcggactgaactggcgcagcgctggccggac
ctgatcgacatcgatgccggacgcattgccaccgggcgcgcgaccatcgaagaactgggc
tgggagttgtttcactattacctggatgttgccagtggcaagcaacagacctgggcggag
aagcacaagctgcataacgacatcaccttgttcaacccggcgccgattacctga
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