Pseudomonas iranensis: HU724_020345
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Entry
HU724_020345 CDS
T07894
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
pie
Pseudomonas iranensis
Pathway
pie00521
Streptomycin biosynthesis
pie00523
Polyketide sugar unit biosynthesis
pie00541
O-Antigen nucleotide sugar biosynthesis
pie01100
Metabolic pathways
pie01110
Biosynthesis of secondary metabolites
pie01250
Biosynthesis of nucleotide sugars
Module
pie_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HU724_020345 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HU724_020345 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HU724_020345 (rfbD)
Enzymes [BR:
pie01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
HU724_020345 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
QXI21357
LinkDB
All DBs
Position
complement(4534655..4535548)
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AA seq
297 aa
AA seq
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MKILLLGKNGQVGWELQRSLAPLGELIALDRNAVDGLCGDLSDLDALRMTIRHVEPEIIV
NAAAYTAVDKAESEPELVDLVNAQASRLMAEEAAVSGAWLIHYSTDYVFSGLGETPWQEV
DAVAPVNQYGASKLAGEQAIIASGCKHLIFRTSWVYSARGNNFAKTMLRLAKNRETLSVI
ADQIGAPTGAELIADVTARAIEQVLFRPELAGLYHLAAAGEVSWHGYASHVIDFAKANGE
ALAVTAINPIDTTAYPTPARRPLNSRLDTQKLRDNFSLHLPDWQSGVTRMLREVLNK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttctgctgggcaaaaacggacaagttggatgggagttgcaacgctcgctc
gcaccgctgggcgagttgattgcgcttgatcgcaatgccgtcgatggtctgtgcggcgat
ttgtccgatctggatgcgcttcgcatgactatccgacacgtcgagcccgagatcatcgtc
aatgcggccgcgtataccgccgttgacaaggctgaatcggaaccggagctggttgatctc
gtcaatgcccaagcgagccggctgatggccgaagaagcggcggtctcgggtgcgtggttg
atacattactccaccgactacgtctttagcggcctgggcgagacgccttggcaagaggta
gatgccgtcgcgccggtgaaccagtatggcgcaagtaaattggcgggcgagcaagcgatt
atcgcttctggctgcaagcacctgatcttccgaaccagttgggtctactcagcgcgtggt
aacaatttcgccaagaccatgctgcggctggcaaagaatcgcgaaacgctgagtgtgatc
gcagatcaaatcggcgcgcctactggtgctgagctgatcgctgacgtcaccgcacgggct
atcgagcaggtcttgtttcgcccggaactggcggggctctatcatctggccgccgccggc
gaagtctcatggcacggttatgccagccatgtgatcgactttgccaaggcaaacggtgaa
gcgcttgccgtcacggcgatcaatccgatcgataccaccgcttacccgacacctgcgcgc
cgtcctttgaattcccgactggatactcaaaaactgcgtgacaatttttctctacacttg
ccggattggcaaagtggtgtaacccgaatgcttagggaagttctgaacaaatga
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