Pigmentiphaga sp. H8: EGT29_13025
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Entry
EGT29_13025 CDS
T05719
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pig
Pigmentiphaga sp. H8
Brite
KEGG Orthology (KO) [BR:
pig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pig03009
]
EGT29_13025 (rimO)
Enzymes [BR:
pig01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EGT29_13025 (rimO)
Ribosome biogenesis [BR:
pig03009
]
Prokaryotic type
ribosomal protein modification factors
EGT29_13025 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AZG08712
UniProt:
A0A3G8GN47
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All DBs
Position
2738917..2740302
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AA seq
461 aa
AA seq
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MSIHSSDSPINTAIPRVAFASLGCPKAASDSEQILTQLRAEGYETSKTYEDADLVIVNTC
GFIDDAVKESLDTIGEALQANGKVIVTGCLGAKKESDGEGVVQKMHPKVLAVTGPHATHE
VMQAVHQHLPKPHDPFSDLVPPQGVRLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSR
PIHEVMREAENLVKAGVKEILVISQDTSAYGVDVKYRTGFVDGRAVRTRMTELVRELSKL
GAWIRLHYVYPYPHVDEVLPLMNEVHENGGRVLPYLDVPFQHASQRILKLMKRPASSERN
LDRIRAWRAICPDLTIRSTFIAGFPGETEAEFEEMLDFLREAELDRVGCFAYSPVEGAAA
NELPDPVPDDVRQERQARFMQVQEAVSRKRLARRVGKVIKCVVDEVGPEGGIARSMGDAP
DIDGKVYVAPVDKPWKRYKVGDIISVRIARSDDHDLWGSVG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccattcatccgattccccgatcaacaccgccattccccgcgtggccttcgcc
agcctgggctgtccgaaggcggcctcggactccgagcagatcctgacccagctgcgcgcc
gaaggctacgagacctccaagacctacgaggacgcggacctggtcatcgtcaatacctgt
ggcttcatcgacgatgcggtcaaggaaagcctggacaccataggcgaggccttgcaggcc
aacggcaaggtcatcgtgaccggctgcctgggcgccaagaaggagtccgacggcgagggc
gtggtgcagaagatgcatcccaaggtcctggccgtgacggggccgcacgcgacccacgag
gtcatgcaggcggtgcaccagcacctgcccaagccccacgatcccttcagcgacctcgtg
ccgccgcagggcgtgcgcctgacgcccaagcactacgcctacctgaagatatccgagggc
tgcaaccatcgctgcagcttctgcatcatcccgtccatgcgcggcgacctggtgtcgcgg
cccatccacgaggtcatgcgcgaggccgagaacctggtcaaggccggcgtcaaggaaatc
ctggtcatttcgcaggacaccagcgcctatggcgtggacgtgaagtaccgcaccggcttc
gtcgacggccgcgcggtgcgtacccggatgaccgagctggtgcgcgaactgtccaagctg
ggcgcctggatccgcctgcactacgtgtatccctatccgcacgtggacgaagtcctgccg
ctgatgaacgaggtccacgagaacggcggccgcgtgctgccgtacctggacgtgccgttc
cagcatgccagccagcgcatcctgaagctgatgaagcgtccggcctcgtccgaacgcaac
ctggaccgcatccgcgcctggcgcgcgatctgtccggacctgacgatacgcagcaccttc
atcgccggcttccccggcgagaccgaggccgagttcgaggaaatgctggacttcctgcgc
gaggccgagctcgaccgcgtgggctgtttcgcctattcgccggtcgaaggcgcagccgcc
aacgaactgcccgatcccgtgcccgacgacgtccggcaggagcgccaggcccgcttcatg
caggtccaggaagcggtgtcccgcaagcgcctggcgcgccgcgtcggcaaggtcatcaag
tgcgtggtggacgaggtgggccccgaaggcggcattgcccgctccatgggcgatgcgccc
gacatcgatggcaaggtctatgtggcgcccgtggacaagccctggaagcgctacaaggtg
ggcgacatcatttccgtccgcatcgcccgctccgacgatcacgacctctggggaagcgta
gggtag
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