Pirellula sp. SH-Sr6A: VN12_00145
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Entry
VN12_00145 CDS
T04360
Name
(GenBank) outer membrane biogenesis protein BamB
KO
K00114
alcohol dehydrogenase (cytochrome c) [EC:
1.1.2.8
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00010
Glycolysis / Gluconeogenesis
pir00620
Pyruvate metabolism
pir00625
Chloroalkane and chloroalkene degradation
pir01100
Metabolic pathways
pir01110
Biosynthesis of secondary metabolites
pir01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VN12_00145
00620 Pyruvate metabolism
VN12_00145
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
VN12_00145
Enzymes [BR:
pir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.2 With a cytochrome as acceptor
1.1.2.8 alcohol dehydrogenase (cytochrome c)
VN12_00145
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Motif
Pfam:
PQQ_2
Malectin
PQQ_3
PQQ
Malectin_like
Motif
Other DBs
NCBI-ProteinID:
AMV30491
UniProt:
A0A142XU64
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All DBs
Position
complement(33828..35732)
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AA seq
634 aa
AA seq
DB search
MRRITCYLALLLSSQVACAEDWPQWQGPNRNAVSSETGLLKTWPEGGPRLAWRIEGLGGG
DSAPAVAGGKIYGLSNRDGQEIVWALSEVDGKELWASSLGDAQPQDVPQSKEGPGGTPTV
DGNRIYVIGMSGRIACLDANEGKVLWKKSLKEDFGGTAPMWNFRESPLIDGDKVICTPGA
SSAMLVALNKNSGEVIWKTTAAAITTPNAPAATASRPNEGERGPRGGQPQSGNAPQAAVV
TGTEDSTLYVSEHWGMTGFNQKLPNGKYQVNLHFAETYQGITTTGQRVFTFTVQGKEFKD
FDPFQKAGGLRKAYVESVPVEVTDGELKITFKQQVENPAIKAIEILPQDSSNKDLKPIRI
NAGASEPFTDSKKQVWSPDQGFVGGQVNPGTFGMAGRGFGPPGNAGGGGRRGGFGGGGRA
GAAYSSIIAIDHEGSRQYVQMTSSAVVGVSADTGEILWQYNKPSNGMGINCSTPIYQDGL
VFAASAYGAGGGAVKLKKTSDGKFEAEEVYFTTSMQNHHGGMIVIDGALYGANGGNGGGI
MTCIDFQTGKILWRDRKGPKGALLYADGRLYLRSEEGPIVLIEPSKEGYKELARFEQPDR
TNVPAWAHPIIANGKLYIRDQGMLLCYDVQASKQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgaatcacatgttacctggcactcttgctgtcgagccaagttgcctgtgctgaa
gattggccgcaatggcagggaccaaatcgtaacgctgtctcgagtgaaaccggcttactt
aagacatggcctgagggtggacctcgattggcttggcgaatcgagggtctcggtggcggt
gacagtgcgcctgcagtggctggaggaaaaatctacgggcttagcaatcgtgacggccaa
gaaatcgtatgggctttatccgaagtcgacggcaaggagctttgggcaagctcgcttggt
gatgcccagcctcaagatgtaccccaatcgaaagaaggtcccggaggaacgccaaccgtc
gatggcaaccgtatctatgtaattggaatgagtggtcggattgcttgcctcgatgctaac
gagggaaaagttctttggaagaagagcctcaaagaggactttggtggaaccgcacccatg
tggaactttcgcgaatcgccacttatcgatggcgacaaggtgatttgtacgccgggcgcc
tccagcgcaatgctcgtagcactgaacaaaaacagcggcgaggtgatttggaaaacaact
gccgctgcgattacaacgccaaatgcacccgctgctactgcaagccgtcccaacgaaggt
gagcgaggtccgcgaggcggtcagccacaaagtggcaatgcaccacaagcggccgtggtt
accggtaccgaagattcaacgctgtatgtcagcgagcactgggggatgactggcttcaat
cagaagctacccaacggcaaataccaagtgaacctacactttgcggaaacctatcaaggt
atcactacaaccgggcaaagagttttcacatttacggtccaaggcaaggagttcaaagac
tttgacccatttcaaaaagctggaggacttcgaaaggcatatgttgaatcggttccagtt
gaagtcacagatggcgagttgaagattactttcaagcaacaagttgaaaatccagcgatc
aaagcgatcgagatacttccacaagactcgagcaacaaggacctgaagccaattcgcatc
aacgccggagcctctgaacctttcaccgattccaagaagcaggtctggagccccgaccaa
gggtttgttggcggacaggtaaatccaggcacctttggcatggcaggtagaggattcggc
ccccctggaaatgctgggggtggcggccggcgaggtggcttcggcggtggaggccgtgca
ggagcggcgtactcatccattattgccatcgatcatgaaggatctcgacaatacgtgcag
atgacctccagcgcagtggtgggcgtatcggcggataccggtgagatactttggcaatat
aacaagccatcgaacgggatgggcatcaactgctcgaccccgatttatcaagacggcctc
gtcttcgcagcctccgcgtatggagcaggcggcggcgcggtgaagttaaagaaaaccagc
gacggtaagttcgaagcagaagaagtctacttcacgaccagtatgcagaatcaccacgga
ggaatgatcgttattgatggagcactttacggtgctaatggtggaaacggtggtgggata
atgacatgtatcgacttccaaacaggcaagatcctgtggcgagatcgaaaaggtccgaaa
ggagctttgctttatgctgatggcaggctttaccttcgaagtgaggaagggccgattgta
ctgattgaaccatcgaaagaaggctacaaggaactcgcgcgattcgagcaacctgatcgc
accaacgtgccagcttgggcgcacccgatcattgctaacggcaagctctacattcgcgac
caagggatgttgctttgctacgacgtgcaagcctccaagcagtag
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