Pirellula sp. SH-Sr6A: VN12_09120
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Entry
VN12_09120 CDS
T04360
Symbol
ybdK
Name
(GenBank) Carboxylate-amine ligase YbdK
KO
K06048
glutamate---cysteine ligase / carboxylate-amine ligase [EC:
6.3.2.2
6.3.-.-]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00480
Glutathione metabolism
pir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00480 Glutathione metabolism
VN12_09120 (ybdK)
Enzymes [BR:
pir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.2 glutamate---cysteine ligase
VN12_09120 (ybdK)
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Motif
Pfam:
GCS2
Motif
Other DBs
NCBI-ProteinID:
AMV32271
UniProt:
A0A142XZB9
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Position
2189452..2190609
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AA seq
385 aa
AA seq
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MRKPPIAFRQTRGCTLGVELELQIIDLHSFDLSSSASELLAYLETQAIPATISPELTESM
IEVSVGVFDSWTELRERLRSVKDQMVDAADWLHVGLTGGGAHPFQQWQDRRIFDKQRFQK
LSSLYGYLAKQFTVFGQHIHVGCESGDQALWRIHALNRFVPHFIALAASSPFFQGEATSF
HSSRLNTVDAFPFSGRAPYVVNWDRFVRDHYEPMLNNGVIKSMKDFYWDIRPKPEYGTIE
LRVCDTPLHVDRAALLAGYLQLLCEGFAADPRAFHESDYMVYSYNRFQACRFGLDANYID
PIDQRHTLLRNHVLETLAWLEGCLDLSDDRVELIEQLHVAAMGLTDAERLVEVYEQSGAV
EDIVRFAIDQWKTESTPTRLLEDAA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaagccaccgattgcttttcgacaaacaagaggctgcaccctcggtgttgagttg
gaattgcagatcatcgatcttcattcgttcgatctatcttcctccgcatccgagttgctg
gcctatttggagacgcaggcaatccctgcgaccatatctcctgagttgaccgagagcatg
atcgaggtgtcggtcggagtctttgattcgtggacggaattgcgagagcgtctcagaagc
gtcaaagatcagatggtggatgctgcagactggcttcatgtcgggttgaccggcgggggc
gcgcatccgttccagcaatggcaagatcgccgcatctttgacaagcaacgatttcaaaag
ctatcttccctctatggatatttggccaagcaattcacggtttttggccagcatattcac
gtcggatgtgagagcggagatcaagccctctggcggatccatgcactcaatcgattcgtg
cctcacttcatcgcgttggcggcttcgtctcccttttttcaaggggaagcgaccagtttt
cattcgtcgcgactcaacacggtcgacgcattcccattcagcggtcgagctccgtacgtg
gtgaattgggataggtttgttagagaccattatgagccgatgttgaacaacggtgtcatc
aagagcatgaaagatttctattgggacattcgccctaagccggagtatggcaccatcgaa
ctgcgcgtttgcgatacaccacttcatgtcgatcgcgccgcgctattggctggctatctt
cagctgctgtgtgaaggatttgcggcggacccgagagcatttcacgaatcagactacatg
gtttattcgtacaatcgcttccaagcctgtcgattcggactcgacgcaaactatatcgat
ccgattgatcagcgtcacacccttctccgcaatcatgtattggagacattggcgtggctc
gaaggctgtttggacctctctgacgatagggtggaattgatcgagcaactgcacgtcgcg
gccatgggcctcactgatgccgagagactggtagaggtttacgaacaatctggggccgtc
gaggacattgttcgatttgcgatcgatcaatggaagacggagtctacgccgacgagactt
ttggaggacgctgcctag
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