Pirellula sp. SH-Sr6A: VN12_12810
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Entry
VN12_12810 CDS
T04360
Symbol
sucB
Name
(GenBank) Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00020
Citrate cycle (TCA cycle)
pir00310
Lysine degradation
pir00380
Tryptophan metabolism
pir00785
Lipoic acid metabolism
pir01100
Metabolic pathways
pir01110
Biosynthesis of secondary metabolites
pir01120
Microbial metabolism in diverse environments
pir01200
Carbon metabolism
pir01210
2-Oxocarboxylic acid metabolism
Module
pir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VN12_12810 (sucB)
09105 Amino acid metabolism
00310 Lysine degradation
VN12_12810 (sucB)
00380 Tryptophan metabolism
VN12_12810 (sucB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VN12_12810 (sucB)
Enzymes [BR:
pir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
VN12_12810 (sucB)
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Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Motif
Other DBs
NCBI-ProteinID:
AMV32998
UniProt:
A0A142Y177
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Position
3134092..3135390
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AA seq
432 aa
AA seq
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MVDIVVPSVGESISEVQISKWLKKEGDWVAAGTDLVDLETEKASVQISAPEDGILLKILK
NNEEFASVGDILATFQPAAKGASPSGSAAPALQPASAPQQPVSSAPASPAADPRVMPAAQ
RALDDHHLQATQVPATGPGGRLLKEDVVRYVSQTSPAAPAAPAPVAPAAPAPTKTVTGTL
APPVSAPTASTGMVQQGSSNRSEEVKPMSMIRRTIASRLVQAQHTAALLTTFNEVDMQPV
MTLRNKYRDAFAEKHGVKLGFMSFFAKAACEALKRYPSVNAEIRGNNIVYRNYCDIGIAI
GGGKGLVVPVLRNVEKMGFAEIERTIGEFASRAMANKLMPEDLEGGTFTISNGGIYGSLL
STPIVNPPQSGILGLHSIQERPIALNGEVVIRPMMYLALTYDHRIIDGREAVTFLKTIKE
VIEDPSRLFLEI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggtagatatcgtcgttccgtcggtcggtgagagtatttctgaagttcaaatcagcaaa
tggctcaagaaggaaggggactgggtcgcggcaggaaccgatctcgtcgatctggaaacc
gagaaggcgtccgtgcagatctccgctccggaagatgggatccttttgaagatccttaag
aacaatgaagagttcgcttcggtaggggacatcctcgctacgttccaaccggcggcaaag
ggtgcttcgccatcaggcagcgccgctcctgctctgcagccagcgtccgcacctcagcaa
cccgtatcttccgcaccggcatcgcccgccgcggaccctcgcgtcatgcctgctgcgcag
cgggcgctggacgatcatcacttgcaagccacccaggtacccgcgacaggcccgggcggt
cgattgctcaaagaagacgtggttcgttacgtcagtcaaacctcaccagcggccccggct
gcacccgcacccgtcgctcctgctgcaccggctcctaccaagaccgtcaccgggacgttg
gcgccaccggtttctgcacccacagcttccaccggaatggttcaacaggggagttcaaac
cggtccgaggaggtcaagccgatgagcatgatccgccggaccatcgcctcccggcttgtt
caagctcagcacacggcagccctgctcaccaccttcaacgaagtcgacatgcagcccgtc
atgacgcttcgcaacaagtaccgcgacgcatttgctgagaagcatggagtgaagctgggc
ttcatgtccttttttgccaaagcggcctgcgaggccctgaaacgatacccatcggttaac
gctgagattcgtggcaacaatattgtctaccgcaactactgcgacatcgggattgcgatc
ggtggcgggaagggtttggtcgtccccgtccttcgcaacgtcgagaagatgggcttcgca
gaaatcgagcgaacgatcggcgaattcgcgtcgcgagccatggccaacaaactgatgcca
gaggatcttgaaggcgggacctttaccatcagcaacgggggtatctacggttctctcttg
tccacgccgatcgtcaacccaccccaaagcgggatcttgggactccactcgatccaggag
cgaccgattgcactcaacggagaggtcgtcattcgccccatgatgtacttggccctgaca
tatgaccaccggattatcgatggtcgcgaggcagtcaccttcttgaagaccatcaaagaa
gtaatcgaagacccctcccgtttgttccttgaaatctag
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