Polynucleobacter ibericus: AOC20_07255
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Entry
AOC20_07255 CDS
T09789
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
piu
Polynucleobacter ibericus
Pathway
piu00540
Lipopolysaccharide biosynthesis
piu01100
Metabolic pathways
piu01250
Biosynthesis of nucleotide sugars
Module
piu_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AOC20_07255 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
piu01005
]
AOC20_07255 (rfaD)
Enzymes [BR:
piu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
AOC20_07255 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
piu01005
]
Core region
AOC20_07255 (rfaD)
BRITE hierarchy
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
KR
adh_short
DapB_N
Motif
Other DBs
NCBI-ProteinID:
QWE08215
LinkDB
All DBs
Position
complement(1425577..1426596)
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AA seq
339 aa
AA seq
DB search
MTIIVTGAAGFIGANIVQALNARGEKNIIAVDDLRPADKYRNLADLDIIDYLDKDEFLEA
FRSGRFGKVKAVFHEGACSDTMETDGIFMMANNYRYTMDLLDICTEQKVQLLYASSAATY
GGSDVFVESREHEKPLNIYGYSKFLFDQVMRKRFAEKANTAQVVGFRYFNVYGPRESHKG
RMASVAFHQYHQYKANGHVKLFGEYGGYGAGEQSRDFVSVEDVVKVNLFFLDHPEISGIF
NLGSGRAQPFNDVAHAVANAMRKLDKAAPASLQELVKEKAIEYIPFPDALKGKYQCFTQA
DLTKLRAAGYTEPFLTVEQGVGRYIEWLEVNSGFLANPL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgactattatcgtaaccggcgcagctggttttattggtgccaatattgttcaggcgctc
aatgcacgtggcgaaaaaaatattattgcagtagatgacttgcgtcctgctgacaagtat
cgcaacctcgctgatttagacatcattgactatctagacaaagatgaatttctagaggca
ttcagaagtggacgatttggtaaggtgaaagcggttttccatgaaggcgcttgctccgat
acgatggaaactgatggtattttcatgatggcgaataactatcgctacaccatggatttg
cttgatatctgcactgagcaaaaagtacagttgctatatgcttcttcggctgcaacttat
ggtggatctgatgtgtttgttgaaagccgtgagcatgagaagcctcttaatatttacggt
tactctaagttcttatttgatcaggtaatgcgcaagcgctttgctgaaaaagccaataca
gcccaggtagttggtttccgctacttcaatgtttacggtcctcgtgagtcccataagggt
cgcatggcatcggtagcttttcatcaataccatcaatacaaagccaatggacatgtaaag
ctatttggcgagtatggtggttatggcgctggcgagcaaagccgtgacttcgtttcagtg
gaagacgtagtcaaagtaaatctattctttttagatcatccagaaatcagtggcatcttt
aatttaggcagtggtcgtgctcagccgttcaacgatgttgcgcatgcagtagcaaacgca
atgcgtaagctcgataaagcagcgccagcgtccttacaagaattggttaaagaaaaagca
attgagtacattccttttccagatgctcttaaaggcaaatatcagtgctttacgcaggct
gatctcactaagctcagagctgccggctatacggagcccttcctcactgttgagcagggt
gtaggaaggtatatcgagtggctggaagtcaattctggatttttagctaaccccttgtag
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