Pseudomonas inefficax: RIN61_07540
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Entry
RIN61_07540 CDS
T09811
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00362
Benzoate degradation
pix01100
Metabolic pathways
pix01120
Microbial metabolism in diverse environments
pix01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RIN61_07540 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
RIN61_07540 (pcaH)
Enzymes [BR:
pix01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
RIN61_07540 (pcaH)
BRITE hierarchy
Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
GAD-like
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
WNN41149
LinkDB
All DBs
Position
complement(1679676..1680395)
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AA seq
239 aa
AA seq
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MPAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPDFSHLGFGAH
DHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPL
DPNFGGVGRCLTDRDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFAISGPSIATKLITQLY
FEGDPLIPMCPIVKSIANPQAVQQLIAKLDMSNANPMDCLAYRFDIVLRGQRKTHFENC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccaggacaacagccgcttcgtgatccgtgatcgcaactggcacccgaaagcc
cttacgcctgactacaagacgtccattgcccgctcgccacgccaggcactggtcagcatc
ccgcagtcgatcagcgaaaccaccggcccggacttttcccacctgggcttcggcgcccat
gaccatgacctgctgctgaacttcaacaacggcggcttgccgatcggcgagcgcatcatc
gtcgccggccgtgtggtcgaccagtacggcaagcctgtgccgaacaccctggtggaaatg
tggcaggccaacgccggcggccgctaccgtcacaagaatgaccgctacctggcaccgctg
gacccgaatttcggtggcgtcggccgttgcctgaccgaccgtgatggctactacagcttc
cgcaccatcaagccgggcccttacccatggcgcaacggcccgaacgactggcgcccggcg
cacatccacttcgccatcagcggcccgtcgatcgccaccaagctgatcacccagctgtac
ttcgagggtgacccgctgatcccgatgtgcccgatcgtcaagtcgatcgccaacccgcaa
gccgtgcagcagttgatcgccaagctcgacatgagcaacgccaacccgatggactgcctg
gcctaccgcttcgacatcgtgctgcgcggccagcgcaagacccacttcgaaaactgctga
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