Pseudomonas inefficax: RIN61_10935
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Entry
RIN61_10935 CDS
T09811
Symbol
ubiD
Name
(GenBank) 4-hydroxy-3-polyprenylbenzoate decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00130
Ubiquinone and other terpenoid-quinone biosynthesis
pix01100
Metabolic pathways
pix01110
Biosynthesis of secondary metabolites
pix01240
Biosynthesis of cofactors
Module
pix_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
RIN61_10935 (ubiD)
Enzymes [BR:
pix01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
RIN61_10935 (ubiD)
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
WNN41788
LinkDB
All DBs
Position
complement(2441763..2443229)
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AA seq
488 aa
AA seq
DB search
MQYRDLRDFIRGLEQRGELKRIQVPISPVLEMTEVCDRTLRAKGPALLFEKPTGFDIPVL
GNLFGTPERVAMGMGAESVDELREIGKLLAFLKEPEPPKGLKDAWSKLPIFKKVVSMAPK
VVKDAVCQEVLVEGDDVDLGALPIQHCWPGDVAPLITWGLTVTRGPNKDRQNLGIYRQQV
IGRNKVIMRWLSHRGGALDYREWCEKNPGQPFPVAVALGADPATILGAVTPVPDTLSEYA
FAGLLRGNRTELVKCRGSNLQVPATAEIILEGVIHPGEMAPEGPYGDHTGYYNEVDSFPV
FTVERITHRQKPIYHSTYTGRPPDEPAILGVALNEVFVPILQKQFPEIVDFYLPPEGCSY
RMAVVTMKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVTDDDINARDWNDVIWAITTRMDP
KRDTVMIDNTPIDYLDFASPVSGLGSKMGLDATHKWPGETTREWGRVIVKDEAVTRRIDE
LWDQLGID
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatcgcgacttgcgcgacttcatccgtggcctggaacagcgcggcgagctcaag
cgcatccaggttccgatctcccccgtcctggaaatgaccgaggtctgcgaccgcaccctg
cgtgccaagggcccggcattgctgttcgaaaaacccaccggcttcgacattccggtgctg
ggcaacctgttcggaaccccggagcgcgtggccatgggcatgggcgccgagtcggtcgat
gaactgcgcgagatcggcaagctgctggccttcctcaaggagcccgagccgccgaagggc
ctgaaggatgcctggtccaagctgccgatcttcaagaaagtcgtgtcgatggcgccgaaa
gtggtcaaggatgcagtgtgtcaggaagtgctggtcgagggggacgatgtcgacctcggc
gctctgccgatccagcactgctggccgggcgatgtggcgccgctgatcacctgggggctc
acagtcacccgcggcccgaacaaggaccgccagaacctgggcatctaccgccagcaggtg
atcggccgcaacaaagtcatcatgcgctggctcagccaccgtggcggcgccctcgactac
cgcgaatggtgcgagaagaaccctggccagccgttcccggtggccgtggccctgggcgct
gacccggccactatcctcggcgccgtgaccccggtgccggacaccctctccgagtacgcc
ttcgccggcctgctgcgcggcaaccgcaccgaactggtcaagtgccggggcagcaatctg
caggtgccggccaccgccgaaatcatcctggagggtgtgatccacccgggcgaaatggcc
ccggaaggcccatacggcgaccacaccggctactacaacgaagtggacagcttcccggtg
ttcaccgtcgagcgcatcacccatcggcagaaaccgatctaccacagcacctacaccggt
cgcccaccagacgaaccggcgatcctcggcgtggcgctgaacgaagtgttcgtgccgatc
ctgcagaagcagttcccggaaatcgtcgatttctacctgccgccggaaggctgctcgtac
cgcatggcggtggtgaccatgaaaaagcagtacccgggccacgccaagcgcgtgatgctg
ggtgtatggtcgttcctgcgacagttcatgtacaccaagttcgttattgtcaccgatgac
gatatcaatgcccgtgactggaatgatgtgatctgggccatcaccacgcgcatggacccc
aagcgtgatacggtgatgatcgacaacaccccgatcgactacctggacttcgcgtcgccg
gtatccgggctggggtcgaagatgggcctggacgccacgcacaagtggccgggcgagact
acacgcgaatggggacgggtcatcgtcaaggacgaggccgtcacccgccgtatcgatgag
ctgtgggatcagttgggaatagattga
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