Pseudomonas izuensis: LAB08_R12050
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Entry
LAB08_R12050 CDS
T08555
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00362
Benzoate degradation
piz01100
Metabolic pathways
piz01120
Microbial metabolism in diverse environments
piz01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LAB08_R12050 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
LAB08_R12050 (pcaH)
Enzymes [BR:
piz01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
LAB08_R12050 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
DUF4198
Motif
Other DBs
NCBI-ProteinID:
BCX66587
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Position
1348837..1349541
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AA seq
234 aa
AA seq
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MTDKPGYRRPQEGTQPAYLHPTYQSTNLRSPSKPLVYLPHSLSEITGPTIGAERVSENDN
DLTAQHKGEPLGERIIIHGRVLDENGLPVPGILVEIWQANAAGRYNHARDLHDAPLDPNF
TGTGRTVTDADGWYQFQTIKPGAYPWGNHHNAWRPAHIHFSLFGPSILTRLVTQMYFPGD
PLLAYDPIYNCVPDTSAKERLIASFDLEKTIPSYALGYRWDIVLRGRDATPMEK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaagcctggttaccgtcgcccgcaggaaggcacccagcctgcgtacctgcac
ccgacctaccaatccaccaacctgcgctcgccgtccaagcccttggtgtacctgccgcat
tcgttgtcggaaatcaccgggccgaccatcggcgccgagcgtgtcagcgagaacgacaac
gacctgaccgcccagcacaagggcgagccactgggtgagcgcatcatcattcacggccgc
gtgctggatgaaaacggcttgccggtgccaggaattctggtggagatctggcaggccaac
gccgccggtcgctacaaccatgcccgcgacctgcacgacgcgccgctggacccgaacttc
accggcaccggtcgcaccgtgaccgacgccgatggctggtaccagttccagaccatcaag
cccggcgcctatccgtggggtaaccaccacaacgcctggcgcccggcgcatatccatttc
tcgttgtttgggccgagcatcctgacgcgcctggtgacgcagatgtatttcccgggcgac
ccgttgctggcgtacgacccgatctacaactgcgtgcccgataccagcgccaaagagcga
ctgatcgccagtttcgacctggaaaaaaccatcccttcctatgccctcggttatcgctgg
gacatcgtcttgcgcggccgcgacgccacgccgatggagaaataa
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