Pseudomonas izuensis: LAB08_R42980
Help
Entry
LAB08_R42980 CDS
T08555
Name
(GenBank) acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
piz
Pseudomonas izuensis
Pathway
piz00907
Pinene, camphor and geraniol degradation
piz01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
piz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LAB08_R42980
Enzymes [BR:
piz01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
LAB08_R42980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
ATP-grasp_3
HlyD_D23
LAL_C2
DUF3182
DNAPolymera_Pol
UPF0150
Motif
Other DBs
NCBI-ProteinID:
BCX69646
LinkDB
All DBs
Position
4879675..4881639
Genome browser
AA seq
654 aa
AA seq
DB search
MPGFTKILIANRGEIACRIQRTAQAMGYRTVAVFSDADADALHVQMADEAVHIGPAPVQQ
SYLNIQAILDAARLTCADAIHPGYGFLSENAGFARACQHAGITFIGPSPEAIEMMGSKRL
SKIAMLNAGVPCIQGYQGAEQDDATLSREAERIGYPLMIKASAGGGGRGMRLVHDAGDLL
EQIRTARSEALHGFGSDELILEQALIEPRHVEVQLFGDQHGNLIYLGERDCSIQRRHQKV
IEEAPCPVMTATLRQAMGEAALKAGRAVNYVGAGTVEFLLDVRGQFYFLEMNTRLQVEHP
VTELITGLDLVAWQLNVAEGQPLPLRQEQVQLNGHAMEVRLYAEDPTRGFLPQTGRIDAW
EPALQSGGVRIDHGLIEGQQVSPFYDPMLGKIIAHGATREEARRKLLRAVQDSVLLGVQS
NQCLLASLLQHPQFISGEFSTGFIARQFADHPCLHPPVPSAEELAIAAALLYQTSAQIHR
GPLAGWRNNTSVPLHYRLGLDDQQWSVALNAVPGEAWRVQVAGRSLELKIIECDGRWATL
EIDGIRRRHAYRLHAGQICLFTRPGSLRLDDRTQALVSSQSSISCGTLKAPMDGAIVDVL
VNEGSPVSKGQLLVVLEAMKMEHPLKSGIDGVLKRLQVRVGDQVKNRQILLEVE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgcccggattcacaaaaatcctgatcgccaaccgcggtgaaatcgcctgccgcatccag
cgcaccgcccaggccatgggctaccgtaccgtcgccgtgttcagcgatgccgatgccgat
gcgctgcatgtacaaatggccgacgaagccgtgcatatcggtccggccccggtgcaacag
tcttacctgaacatccaggcgatcctcgacgcggcgcgcctgacctgcgcggatgcgatc
catccgggttacggttttctctctgaaaacgccgggttcgcccgtgcttgccagcacgcc
ggcatcaccttcatcgggcccagccccgaagccatcgaaatgatgggcagcaaacgcctg
tcgaaaatcgccatgctcaatgctggcgtgccgtgcatccagggctatcagggcgccgaa
caggatgacgcaacgctcagtcgcgaagccgaacgcatcggctacccactgatgatcaag
gccagtgccggaggtggcgggcgcggcatgcggctggtgcatgatgccggtgatttgctg
gaacagattcgcaccgctcgctccgaagccctgcacgggtttggcagcgacgaactgatc
ctagaacaggcgttgatcgagccccggcatgtcgaggtccagctgttcggcgaccagcat
ggcaacctgatctacctcggcgagcgcgattgttcgatccagcgccgccatcagaaagtc
atcgaggaagcgccgtgcccggtcatgaccgccactttgcgccaggccatgggtgaagcg
gcgctcaaggccggtcgggcggtgaattacgtcggtgcgggcaccgtggaattcctgctg
gatgtgcgcgggcagttttatttcctggagatgaacacccggctgcaagtggaacacccg
gtcaccgaactgatcaccggcctggatctggttgcctggcaactgaacgtcgccgaagga
caaccgctgccgttgcgtcaggagcaggtacaactcaacgggcatgccatggaggtgcgc
ctgtatgccgaggacccgacccggggctttctgccacaaaccgggcgcatagacgcttgg
gaaccggcactgcaaagcggcggcgtacggattgaccatggcctgatcgaaggccagcag
gtcagccctttctacgatccgatgctgggcaagatcatcgcccatggtgccacccgcgag
gaggcccggcgcaagttgctgcgggcggtgcaggacagcgttctgctgggggtgcagagc
aaccagtgcctgctcgccagcctgttgcagcacccgcagttcatcagcggcgaattcagt
accggattcattgcccggcaattcgctgaccatccgtgcctgcatccccctgtaccgagt
gccgaggaactggcgattgccgccgccctgctttaccagacctcggcccagatacaccgc
gggccgctggccgggtggcgcaacaacaccagtgtgccgctgcattatcgcctcggcctg
gacgatcagcagtggtcagtggcgctgaacgccgtaccgggcgaagcctggcgtgttcag
gtcgccggccgcagccttgaactgaagatcatcgagtgcgacgggcgctgggccaccctg
gaaatcgacggcatccgtcgtcgccatgcctaccgactgcacgccgggcaaatctgcctg
tttacccgccccggcagcctgcgactggatgaccggacccaggcattggtcagcagccag
tccagtatcagctgcggcaccctcaaggcgccgatggacggcgccattgtcgatgtgctg
gtcaacgagggcagcccggtcagcaaggggcaattgctggtggtgctggaggcgatgaaa
atggagcatccactcaagtcgggcatcgatggcgttctcaagcgcctgcaggtgcgcgtc
ggcgatcaggtgaagaatcgtcagattttactggaggtcgaataa
DBGET
integrated database retrieval system
