Penaeus japonicus (kuruma prawn): 122255944
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Entry
122255944 CDS
T07703
Name
(RefSeq) DNA-directed RNA polymerase II subunit rpb2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03020
RNA polymerase
pja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122255944
09124 Replication and repair
03420 Nucleotide excision repair
122255944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pja03021
]
122255944
03400 DNA repair and recombination proteins [BR:
pja03400
]
122255944
Enzymes [BR:
pja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122255944
Transcription machinery [BR:
pja03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122255944
DNA repair and recombination proteins [BR:
pja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122255944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
SPRY
Motif
Other DBs
NCBI-GeneID:
122255944
NCBI-ProteinID:
XP_042876262
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MRRVYEHKTLHRQQVDSITYNPSQHGFICPIETPDNHNVGRIIHLATGCQISQVESSKKI
KNFLMEQGITAFDELKDFSQSLIFLNGDFVGGTKRDVQDLCSALRKYRRKNNLQISCNVR
HGDVYIYTDAGRPIQPVFLTENGKLVVEESDLNPNVSLEVLQNQNKVDFLDCEEKNQSAI
AKDKDSIKETDQYCFTNPVLILGVAASIVPLISHIPPFRAMVGSRMVKQAFGKQKMTTDD
QGYIDAPETPLVVSFMAKALGLSNMYSGQRALVAIMPVRGGYNEDDGIVMRKKSIEHGLF
DSTHVTTIKINVENQGYEYATPGEFLRHKKPFCVLQNGKKFFLADDACSPFLKQVYMNNY
SQVLHFVFEYKRRLLIGDKMSDFSGMKGVVCHLRDDDEMPRMKDGTIPDVIMSPHSFPKR
MTVGCLMDIAMGIIAMHKNEVQYVTAFQKKWTGEYVLQTMKELGISTTQPFYTSQGHLIG
NVYCGPLFYMRLAQLVSKKSNVILKPRMELGAPLPIHGLSQGGGLRLGEMEMYAMLSSNN
DAELTGFFKRQLGRYPYCRTCCLFAVCVRKFVFCPRCKEEGDVAMMELPVETKLWVDQCH
LAGVGFKVSHKPLGAPELTSEDIQEAPERAEAAAKRGRSPDSDDDDERDPKRPALETIQE
VVSTAKAAERMVASWEGLSMTEAATRSKDLFQKYFEEC
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgtgtgtacgagcacaaaacgctgcacaggcagcaagtggacagcataacttat
aacccgagtcaacatggattcatttgtcccatagaaacgccagacaatcataatgtcgga
aggatcatacatcttgccactggatgccaaatctcgcaagtagaaagtagtaaaaagata
aagaatttcctgatggagcaaggcatcacagcgttcgacgaactgaaagacttcagccag
agtcttattttcctgaacggtgactttgtcggcgggacgaaaagggacgtgcaggatttg
tgttcggcattgaggaaatacaggaggaagaacaacttgcaaataagttgcaatgtgagg
catggggacgtttatatctacaccgatgctggccgcccaattcagcctgtctttctaaca
gagaatgggaagttagtagtagaagaaagcgatttaaaccccaacgtttccctggaagtc
ctgcagaatcagaataaggtcgatttcctcgactgtgaggaaaagaaccagtcggccatc
gccaaagacaaggactcaatcaaggagacagaccagtattgctttacgaatccggtcctc
atcctgggcgtggctgcctcgatcgtcccactcattagtcacattccacccttccgagca
atggtcggttcgaggatggttaagcaggcctttgggaagcaaaaaatgacgacagatgac
caaggatatatcgacgcaccggaaacaccgctcgttgtgtccttcatggccaaggctcta
ggactgagcaacatgtactctggacaaagggccctcgtggccattatgccggtcagagga
ggctacaacgaggatgacggcattgtcatgaggaagaagtccatcgaacacggcctgttc
gactcgactcacgttacgacgatcaagatcaacgtcgagaatcaaggctacgagtatgcc
actcctggagagttcctgcgtcataagaagcctttctgcgtcctgcaaaacgggaagaag
ttcttcctggccgatgacgcctgtagtccatttcttaagcaagtgtacatgaataactat
tcgcaagtgctacactttgtgtttgaatacaagcgcagattgttgatcggcgacaaaatg
tccgacttcagcggcatgaagggtgtggtatgccatcttagggacgatgacgaaatgccg
agaatgaaggacggaacaattcctgacgtcatcatgagtccgcattcattcccaaagcga
atgacagtcggatgcctgatggatattgctatgggcattattgccatgcacaaaaatgag
gtgcaatacgtcacagccttccaaaagaaatggaccggcgaatacgtccttcagacgatg
aaggagttgggcatttcaaccacccagcctttctacacatcccaaggacatctcatcggt
aatgtgtactgtggccctctcttctacatgcgtcttgctcaactcgtctcaaagaagagc
aacgtcattttgaagccacgcatggagcttggtgcccccctccctatccacggcctgtct
cagggcggaggcctgcgtttgggcgagatggagatgtacgccatgctctccagcaacaac
gatgcggagctcacggggttcttcaagcggcagctcggccggtacccgtactgtcggacg
tgctgcctcttcgccgtgtgtgtccgcaagttcgtgttctgcccgcggtgcaaggaggaa
ggggacgtggcgatgatggaactgcctgtggaaacgaagctgtgggtcgaccagtgccat
ctggccggcgtcggctttaaagtgtcccacaagcccctcggtgctcccgagctgacctcg
gaagacatccaggaggcgccagagagagcggaagccgcagccaagagaggccgcagccca
gactctgacgacgatgacgagagggatcccaagaggccggccctggagaccatccaggag
gtggtaagcacagcgaaagccgcagaaaggatggtcgccagctgggaaggcctcagcatg
acggaagcagcgacgcgcagcaaggacctgtttcagaagtatttcgaggagtgttag
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integrated database retrieval system
