Penaeus japonicus (kuruma prawn): 122255990
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Entry
122255990 CDS
T07703
Name
(RefSeq) DNA mismatch repair protein Msh6-like isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122255990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pja03400
]
122255990
DNA repair and recombination proteins [BR:
pja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
122255990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
ENTH
Motif
Other DBs
NCBI-GeneID:
122255990
NCBI-ProteinID:
XP_042876331
LinkDB
All DBs
Position
Unknown
AA seq
1284 aa
AA seq
DB search
MAKQATLFTFFSKSNTPNKPKREETTPNKVKLKGNDFKALDLVWAKLDGYPWWPGLVCDS
PSEKTFMRKGQIHVQFFDNPPTRGWVRETFLKPYCPPGENGIPTYKDPKWIRATGEADGA
KELPIEDRNLLIVEMIPSDEEDEAMETDEDADSDKSKENVDANISGRKDNKKNKKNADSE
PKTKRRRIILHSDSESEDDYKPENEGNESEDGSASSGVDEDDMTEPETESEIDSPVKAPN
NKRKRPAPGGRNLNSSLASSPSVSKTSGSTPKVSEGTKSKLSLFAAKETPAKAEDTTENY
DFMNHPWLKPEGIRDRERRRPDHPDYNPRTVYVPDDFLNQQTPGLRQWWELKSRHYDTVL
FFKMGKFYELFHMDAMIGVQELGLLMMKGEKAHSGFPEIAYGRYSATLIEKGYKVARIEQ
TETPDMMEKRCKKMGRPTKFDRVVKREVCQISTRGTRVYSVLDGEASESSTNYLLAISEK
AKAGAGDGRDYGVAFIDTSIGTFHVGQFSDDRHASRLSTLMAHYPPAQILYERGRFSQKT
QKLVTMSVPANLREALVPEKEFWTASKTLSFLAEGTYFKDEEGSLQWPEELQKMMDKSDT
LGKSASPEWELGLSALGALVWYLMDCRLEEQLLTRKRFETYNPLDEAVSAEQGKKETVPA
FISGRHHMVLDGTTLRNLEVFENNSGGFEGTLIERLDRCSTPFGKRLLRSWLCAPLCSPS
SINSRLDAIEDLRNNPEVLEEVAPQLKGLPDLERILSKIHSQGLKRSKNHPDSRAIFFED
EKYNKRKVEDFLAALNGFKATLQIMKAFKGIVSSLQSDLLKKCVSSTKSGGKFPDLKEPL
DFFENAFDHHEAKREGKIIPSKGVDEEFDEAEEKINDTKANLAEYLKEQCKHFGAKVVYW
GNDKKRYQLEVPDHACKKAGNEYELVSQKKGYKRFWTPTTKDLLADMIAGEEHHRTALKD
IARRIFEQFDNHHEKWEAVVQCISVLDVLISLTRYSQETNSNRPSISIPSEDVQPFIEIR
DGLHPCVVTTFSGDEFIPNDVVLGGSSEDAHSPLVLVTGPNMGGKSTLMRQTALICILAQ
LGSFVPASSCQLTPVDRVFTRLGASDRIMMGESTFFVELAETSSIIQHSTNHSLVLVDEL
GRGTATYDGTAIASAVVEALVKLKCRTLFSTHYHSLVDDFVDCKNVSLGHMACMVEGENE
EDPSQETITFLYKFTGGACPKSYGFNAARLADLPDEVIRRGSQKARELEKNTIKKRTFTE
IFRAESTGNLNLKGSIKKIIDIAA
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacaggcgacgctttttacattcttctccaagtcaaatactccaaataaaccc
aagcgcgaagagacaacgcctaacaaggtcaaattgaaggggaatgatttcaaggccttg
gacttggtatgggcaaagctcgatggctacccttggtggccaggccttgtgtgtgacagt
cctagtgaaaagaccttcatgcgcaaggggcaaattcatgtccagtttttcgataatcca
cctacaagaggatgggtcagagaaacattcctgaaaccctattgtcctcctggagagaat
ggcattcctacctacaaggaccccaagtggatcagagccactggggaagccgatggtgcc
aaggaactccctatagaggaccgcaatcttctgattgttgaaatgattccttctgatgag
gaggatgaagcgatggaaacagatgaggatgcagatagtgacaagagtaaggagaatgtt
gatgccaatattagcggcaggaaagataataaaaagaacaagaagaatgcagacagtgaa
ccaaaaacaaaaaggaggagaattattttacattctgacagtgaatctgaagatgattat
aaaccagaaaatgaaggcaatgagagtgaagatggctcagccagctctggtgtagatgag
gatgatatgactgaacccgaaacagagtctgagattgattctcctgtgaaggcaccaaat
aacaaacgaaagaggccggcccctggaggccgtaacctgaattcctctttggcttcatca
ccttcagtatccaagacatcaggcagtacacccaaagtttctgaaggaacaaaatcaaaa
ctgtcgctctttgcagcaaaagagactccagctaaggcagaggacactactgaaaattat
gatttcatgaatcatccttggctgaaaccagaaggcattagagatcgtgaaagacgtcgc
ccagatcacccggactacaacccaagaactgtctatgtcccagatgatttccttaaccag
caaactccaggtctgaggcagtggtgggaactcaagtctcggcattatgacactgtacta
ttcttcaagatgggcaaattctatgagctgtttcatatggatgccatgattggagtccaa
gagcttggcttacttatgatgaagggggaaaaggcacattctggttttccagaaattgct
tatggacgttattcagccactttgattgagaagggctacaaggtggctcgtattgaacag
acggaaaccccagatatgatggagaaaagatgcaaaaaaatgggtcgtccaacaaagttt
gatcgtgttgtgaaacgtgaagtgtgccagattagcacaagaggaaccagggtttacagt
gttttggatggtgaagcttcagaatcctcaacaaattatcttctggctatctcagagaag
gcaaaagctggggctggtgatggtcgtgactatggagtagccttcattgacactagcatt
ggaaccttccacgttggtcagttttcagatgaccgtcatgcttcacgcctgagcaccctc
atggctcactatcctccagctcaaattctttatgaacggggacgattttcacagaagaca
caaaaacttgttacaatgtcagtgcctgccaatttgagggaggccttggtacccgagaag
gaattttggacagccagcaaaacactaagtttcttagctgagggcacatacttcaaggat
gaggaaggatctttgcagtggccagaagaacttcagaaaatgatggataaaagtgacacc
ttaggaaaatctgcatctccagaatgggaacttggcttgtctgccttaggtgcacttgtt
tggtacctgatggactgtcggttagaggagcagttgctcaccaggaaaaggtttgaaacc
tacaatccattagatgaagcagtatcagcagaacaagggaagaaggaaacagttcctgct
ttcatcagtgggaggcaccacatggtacttgatggcacaaccctacgcaacttggaagtg
tttgagaacaacagtggtgggtttgaaggaacccttattgagagacttgacagatgctcc
actccatttggcaaaagacttctacgcagctggttgtgtgctcctttgtgtagtccctct
agcatcaatagccgtcttgatgccatagaagacttgagaaataacccagaagttttagag
gaggtagctcctcagttgaaggggttacctgacctggagagaattttgtccaaaatacac
tctcaaggcctgaaacgtagcaagaatcatccagatagcagagcaattttctttgaagat
gaaaaatacaacaagaggaaggtggaagattttcttgctgctctgaacggattcaaagca
actttacaaatcatgaaggcttttaaagggattgtgagttctctgcaatcagacttgctg
aagaaatgtgtcagtagcacaaagagtggtgggaaattccctgacctcaaggaacctctg
gacttttttgaaaatgcatttgatcaccatgaggctaaaagggaaggaaagattatcccc
agcaagggtgtggatgaagaatttgatgaagcagaagaaaaaataaatgatactaaagcc
aatttagcagaatatcttaaagagcagtgtaaacattttggtgcgaaggttgtttattgg
ggcaatgacaaaaagagataccagcttgaagtcccagatcatgcctgtaagaaagctggt
aatgaatatgaactagtgagtcagaagaaaggatacaaacgattctggactccaacaaca
aaagacttgcttgcagatatgattgcaggtgaagagcaccacagaactgcattgaaggat
attgcacggagaatctttgagcagtttgataaccatcatgagaaatgggaagcagtggtg
cagtgtatatcagttttggatgtacttatctctctcactcgttactctcaagagacaaat
tccaacagaccatccatatctatacctagtgaagatgtgcagccattcatcgagattcgg
gatggtcttcacccatgtgttgtaactaccttcagtggagatgaatttattcccaatgat
gtggtgcttggtggaagcagtgaagacgcacactcgcccttagtcctggtgacaggtcct
aacatgggtggtaaatcaacactcatgagacagactgctctaatatgcatccttgctcaa
ttgggttcatttgtaccagcaagttcttgccaattaacccctgttgaccgagtttttaca
agacttggtgcctcggatagaattatgatgggagaatccactttctttgttgaactggct
gaaacttcctccataattcaacattctacaaaccactctctggttttggtggatgagctt
ggtcgaggtacagcaacatatgatggaacagccatagcttcagcagttgtagaggcactt
gtgaagttgaaatgccgtactctcttctcaactcattatcattctttagttgatgacttt
gtcgactgtaagaatgtctcattagggcatatggcttgtatggttgaaggagagaatgaa
gaagatccttctcaggaaactattaccttcctgtacaagtttacaggtggtgcatgtcca
aagtcctatgggtttaatgcagcccgtcttgctgatctgccagacgaagttatacggcgt
ggaagtcagaaggctcgggaacttgagaagaataccatcaagaagagaacatttacagaa
atatttagagcagagagtacaggaaaccttaatctcaagggttccataaagaaaattatt
gatattgctgcatga
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integrated database retrieval system
