Paenibacillus sp. JDR-2: Pjdr2_0136
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Entry
Pjdr2_0136 CDS
T00977
Name
(GenBank) DNA-directed RNA polymerase delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pjdr2_0136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pjd03021
]
Pjdr2_0136
03400 DNA repair and recombination proteins [BR:
pjd03400
]
Pjdr2_0136
Transcription machinery [BR:
pjd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pjdr2_0136
DNA repair and recombination proteins [BR:
pjd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pjdr2_0136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
Motif
Other DBs
NCBI-ProteinID:
ACS98816
LinkDB
All DBs
Position
146244..146825
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AA seq
193 aa
AA seq
DB search
MSSGNIALKLDPERIKEMPMVDLAFELLKSANTPYYYRDLMMEIAKVRGLSADGVNQVIA
QVYTEINIDGRFACVGSNMWGLKRWYPVEKNEDPITNAKRPRIINDEDDDEDLFADEEDD
SYTADEEDYDSYDEDREFGEAEAEEEVDEEVGIEDEELEDDESEEEIDADAELDDEDSED
EDFEDDEEEEDDK
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcggcaatattgcattgaagctcgatcctgagcggataaaagaaatgcctatg
gtcgacttggcgtttgaattgttgaaatcggccaatacgccttattactaccgtgacctg
atgatggaaatcgcgaaggttcgcggcctgtctgcggacggagttaaccaagtaatcgct
caagtatatacggagattaatattgacggccgtttcgcctgcgttggaagcaatatgtgg
ggattgaaacgctggtatccggttgaaaagaacgaggatccgatcacgaacgcgaagcgt
cctcgtatcattaatgacgaagatgatgatgaagatctgttcgcggatgaagaagatgat
tcgtacacagcggatgaggaagattacgattcttacgatgaagatcgtgaattcggcgaa
gcggaagctgaagaagaagttgacgaagaggttggcatcgaagacgaagaactcgaagat
gatgagtctgaagaggaaatcgacgctgatgctgagcttgacgatgaagactccgaggac
gaagattttgaagacgatgaggaagaagaagacgataaataa
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