Paenibacillus sp. JDR-2: Pjdr2_1600
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Entry
Pjdr2_1600 CDS
T00977
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00270
Cysteine and methionine metabolism
pjd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Pjdr2_1600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pjd03000
]
Pjdr2_1600
03032 DNA replication proteins [BR:
pjd03032
]
Pjdr2_1600
03036 Chromosome and associated proteins [BR:
pjd03036
]
Pjdr2_1600
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pjd02048
]
Pjdr2_1600
Enzymes [BR:
pjd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
Pjdr2_1600
Transcription factors [BR:
pjd03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
Pjdr2_1600
DNA replication proteins [BR:
pjd03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
Pjdr2_1600
Chromosome and associated proteins [BR:
pjd03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Pjdr2_1600
Prokaryotic defense system [BR:
pjd02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
Pjdr2_1600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
ACT00269
LinkDB
All DBs
Position
1875205..1876881
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AA seq
558 aa
AA seq
DB search
MKQLLRELIVDNFAGGGGASTGIELAIGRSVDVAINHDPAAIAMHKANHPDTEHYCESVW
DVDPRQVARGQQVALCWLSPDCKHFSKAKGGKPKEKGIRGLAWVAVRWAATVRPRVIMLE
NVEEFKTWGPLLKDGMPDPDKKGKTFKAFINALKRQGYEVDYRELRACDYGAPTIRKRFF
LVARCDGKPIVWPKPTHGDPNSIEVKKGLLKPWRTAGEIIDWSLECMSIFERKKPLAENT
MRRIARGIHKFVLNNPNPFVIKVNHQGEMFRGQQISEPLQTVTAKNGWGIVTPYIARIGQ
TGFGGDRLSYEMDTPLTTVTTKAEHLLIQPKMVAAFLAQYHSETASHDARGQELDRPILT
LDTSNRYGLVAAHLARHFGESVGSSADDPVGTVTAGGGGKTSLVTSHLIKMKGTNIGQPI
TDPVQTITAGGLHFGEVRAFLMKYYGTGEGQEISEPLHTIPTKDRFGLVTVHGQDYAIVD
IGMRMLEPHELFAAQGFPEEYIISKDADGKQYPKSAQVARCGNSVPPPFAEHLVRANLPE
LCKDVPYGGEHQLELQLV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagctccttcgagaactgatagtcgataacttcgccggcggcggtggggcaagc
acaggaattgaactggcgatcgggcgaagcgtcgatgtagcgattaatcatgatccagca
gccatagcgatgcacaaggcaaaccatccggacacagagcattattgcgagtcggtatgg
gatgtcgatccgcgacaggtagcccgggggcaacaagtggcactgtgctggctctcaccg
gattgcaagcacttcagtaaggcgaaaggcggaaagccaaaggagaaaggtatccgtggt
ctagcgtgggtagcagttcgttgggcggcaacggtccggccgcgggttatcatgctggag
aacgttgaggaattcaaaacgtgggggccgctgcttaaggacggcatgccagatccggat
aagaagggcaagacattcaaggcattcataaatgccctgaaacggcaaggatatgaagtt
gattatcgggagctccgggcatgcgattacggagcgccgacaattcgaaagcgattcttt
ctagttgcccggtgtgacggcaagccgattgtctggccgaagccaacccacggggacccg
aacagcattgaggtaaaaaaggggctgctaaaaccgtggcggacggccggggaaattatt
gattggtcgcttgagtgcatgagcatcttcgaacggaagaagccgctggctgagaacacc
atgcgccggatcgcgcggggaattcataagttcgtacttaacaacccaaacccatttgtc
atcaaggttaatcatcaaggcgaaatgtttagagggcaacaaattagcgaacctttgcaa
acggtgacggcaaagaacggatggggcatcgtcactccgtatatagctcggatcgggcag
accggattcggcggagatcgactgtcatacgagatggatactccgctaacgacggtaaca
acaaaggcagagcaccttctaatccagcccaaaatggtagctgcattccttgctcagtat
cacagcgaaacggccagtcacgatgcccgcgggcaagagcttgatcgtccgattctgacc
ctcgatacatcgaaccgatacggcctagttgctgctcaccttgctcgtcactttggagaa
tcggttggcagctcggcggatgatccagttggcactgtaaccgccggcggtggaggaaag
acttcgctcgtaacaagtcatctgatcaagatgaagggaacgaacatcggacagccgata
acagacccggtacaaaccattactgccggcgggctacactttggcgaggttcgcgccttc
ttgatgaaatactacggcaccggcgaaggacaggaaatcagcgagccgctgcacactata
ccgacaaaagatcgtttcggactcgtgacagtacacggccaggattacgcgatcgtagat
atcggcatgcggatgctggagcctcacgagttgttcgcggcacaggggttcccggaggaa
tacatcatttccaaggatgcagacggcaagcagtatccgaaatctgcacaggtagcccgc
tgcggaaactcggtaccgccgccgttcgcggagcatctggtaagggcgaacctgccggag
ctttgcaaggatgtaccgtatggcggagaacatcagctcgagctgcagttggtgtaa
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