Paenibacillus sp. JDR-2: Pjdr2_3922
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Entry
Pjdr2_3922 CDS
T00977
Name
(GenBank) thiamine biosynthesis/tRNA modification protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00730
Thiamine metabolism
pjd01100
Metabolic pathways
pjd01240
Biosynthesis of cofactors
pjd04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Pjdr2_3922
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Pjdr2_3922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pjd03016
]
Pjdr2_3922
Enzymes [BR:
pjd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
Pjdr2_3922
Transfer RNA biogenesis [BR:
pjd03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Pjdr2_3922
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
NAD_synthase
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ACT02552
LinkDB
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Position
complement(4469012..4470232)
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AA seq
406 aa
AA seq
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MIYDKVIVRYGDLVMKGRNRNQFEKRMQQQIKLALKSFAALTYAKSFGRMTISLNGESFE
PIAERLKDVFGIISFSPVIQVENELEKIQAGALQLMTGLEKEPATFKVNAKRAWKPFKHS
SQEMNHLVGSHVLRAFADLKVDVRKPEVELRVDTYEEGTFIYNTVIPGAGGFPFGSNGKA
MLLLSGGIDSPVAGWMAMRKGLELEAVHFHSYPFTSDKAKEKVIDLARRLSYYAGAPLKL
HLVPFTDIQTRLVQAKQDSMMITLMRRAMLRITEQLADRNGAGGIVTGESLGQVASQTLS
SMNVIGRATVLPLLKPLIMMDKQEIINEAVRIGTFETSILPYEDCCTLFLPKSPSTNPNL
NVVERAESYIPELVQMLLEAVERTEVIELTPEAQPEQEPAGEDRWF
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
gtgatttatgataaagtaattgtccgctatggcgacctcgtcatgaagggacgcaaccgc
aatcaattcgagaagaggatgcagcagcagatcaagctagctctgaagagctttgccgca
ttgacgtacgccaagtccttcggcaggatgacgatttccttgaacggcgagtcgtttgaa
ccgattgcagaacggctgaaggatgtatttggcattatctcgttcagcccggtcattcag
gtagagaacgagttggaaaaaatccaggctggggctttgcaattgatgacagggctggag
aaagaaccggcaacctttaaagtaaacgcaaagcgtgcttggaagccgtttaagcattct
tcacaggaaatgaatcatcttgttggttcccatgtgctgcgcgcttttgccgatctgaaa
gtagacgtgcggaagccggaagtggagctgcgcgttgatacttacgaagaaggcaccttc
atttacaacacggtaattccaggggcaggaggattcccgttcggctccaacggcaaagcg
atgcttctgctgtcgggcggtattgacagcccggtagcgggctggatggccatgcgtaag
ggcctggagctggaggcggtgcatttccacagctacccgtttaccagcgacaaggcgaag
gagaaggtcattgacctcgctagaagactgtcttactatgcaggagcgccgctgaagctc
catctggtgccttttaccgatattcagacaaggctggtacaggccaagcaggatagcatg
atgattacgctgatgcgccgtgcgatgcttcgcattaccgagcagctggctgacagaaac
ggtgccggcggcatcgtaacgggcgagagcctcggtcaggtggccagccagacgctctca
agcatgaatgttatcggacgggcaacggtactgccattgctgaagccgcttattatgatg
gacaagcaggaaattattaacgaagcggtgcggattggaaccttcgaaacctccatcctt
ccttacgaagactgctgtacgttattcctgccgaaatcgccaagcacgaatccgaatctg
aacgttgtggaacgggcggagtcctatattcccgagcttgtacaaatgctgcttgaggcc
gtggagcgtacagaagtcatagagttgacgcctgaagcgcagccagagcaggaaccggca
ggggaagaccgctggttctaa
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