Pantoea jilinensis: KTJ90_00645
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Entry
KTJ90_00645 CDS
T08640
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pji
Pantoea jilinensis
Pathway
pji00540
Lipopolysaccharide biosynthesis
pji01100
Metabolic pathways
pji01250
Biosynthesis of nucleotide sugars
Module
pji_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pji00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
KTJ90_00645 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pji01005
]
KTJ90_00645 (rfaD)
Enzymes [BR:
pji01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
KTJ90_00645 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pji01005
]
Core region
KTJ90_00645 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
NAD_binding_10
DUF6716
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
QXG54702
LinkDB
All DBs
Position
complement(140999..141931)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKALNDRGHTDILVVDNLKDGTKFANLVDLDIVDYMDKEEFLMSV
MAGDDLGPIEAVFHQGACSSTTEWDGKYMMENNYQYSKELLHFCLEHEIPFLYASSAATY
GGRNENFIEERQYEQPLNVYGYSKMLFDHYVRQMLPEANSPVCGFRYFNVYGPREGHKGS
MASVAFHLNTQISNDENPKLFEGSDGFKRDFIHVDDVAEVNLWCWENGVSGIYNCGTGRA
ESFQEVADAVLKFHQKGQIEYIPFPEKLKGRYQAYTQADLTKLRAAGYDKPFKTVAQGVA
DYMVWLNRNA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaactggcggcgcaggaatgattggcagcaacatcgtcaaagcgctgaac
gatcgcggtcacaccgacattctggtggtggataatctgaaggatggcaccaagtttgcc
aatttagtcgacctggatatcgtcgattacatggacaaagaagagttcctgatgagcgta
atggcgggcgatgatttaggcccgatcgaagcggtattccatcagggtgcctgctcctcc
accactgagtgggatggcaagtacatgatggaaaacaactatcagtactctaaagagttg
cttcacttctgtcttgagcacgagatcccgttcctctacgcctcttctgcagcgacctac
ggcggacgcaacgagaatttcattgaagagcgccagtatgagcagccactgaatgtctat
ggctactccaaaatgctgttcgaccactatgtccgccagatgctgccggaagcgaattcg
ccggtgtgcggcttccgctatttcaacgtctacggaccgcgtgaaggccataaaggcagc
atggcaagtgtggctttccatctgaacacgcagatcagcaacgatgaaaatccaaaactg
tttgaaggcagtgacggctttaaacgtgacttcattcacgttgatgatgtggcggaagtg
aacctgtggtgctgggaaaatggcgtctccggaatttacaactgtggcacaggccgcgcc
gaatccttccaggaagtggctgatgcggtcctgaaattccatcagaaaggccagattgag
tacattccgttcccggaaaaactcaaaggacgttatcaggcttatacccaggccgatctc
actaagctacgcgccgcgggttacgacaagccatttaaaacagtggcccagggcgttgct
gactatatggtctggctgaaccgcaacgcataa
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