Pantoea jilinensis: KTJ90_18445
Help
Entry
KTJ90_18445 CDS
T08640
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pji
Pantoea jilinensis
Brite
KEGG Orthology (KO) [BR:
pji00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
KTJ90_18445 (hmsP)
Enzymes [BR:
pji01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
KTJ90_18445 (hmsP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
QXG54526
LinkDB
All DBs
Position
complement(3946886..3948892)
Genome browser
AA seq
668 aa
AA seq
DB search
MRVSRSLTIKQMATVSLVAVITISIFIVIQLFHFVQQRRIDYAQQMENIAHTVRQPLSEA
VLRADIPQAERILHSLKPAGILSRADVVLPNAFQALHADFEVEKPVPRLVARLFELPVQI
TLPLYSVENTGMPKPLAYLVLQANSTRVYQFILSTLSTMIITYLLLALILSVAISWCINR
LVVHPLRNLSRELQELPPQSILTHKLSLPQSHRDDEIGMLVRSYNRNQQVLESIHDEMSR
LTTHFPVTDLPNRTLFLALVDQCMRMPEQSLGLMVIRIETLQEANGVLSDEQRDTLMLTL
VEKIRNTLDDHTLLAQTGTSDFVLLMKRASNPFRALRLARNLMIRLNQPVNLHQLQLRPN
LSIGLALREDQPLSANELLDRATSAMMSARHQGKNQILFFDAALTERAQKRLTQEHDILQ
GLHDDQFALYLQPQVDMRTGALTGAEALLRMRQPDGSYGLTEEFIASAEEIGVISAIGRW
VFEEACRILAGWQRQGIMLPLSVNISAVQLRDTGVVSHLQALLTRHRIAPDTLVLEVTET
AQLDDAEQAMSMLRLLQQTGVAVALDDFGMGYSNLNYLHQLKALPVNKLKMDRSFVAALP
HDDTMVRIVAAIAEIIHLEVIAEGVETAEQRDWLLARGIAIGQGYLYAEALPLTRFNQAW
IENSSLPQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtaagccggtcacttacgataaagcagatggcgacagtttcgctggttgcggtt
atcaccatcagtatctttatcgtcatccaactgtttcattttgtgcagcagcgcagaatt
gactacgcccagcagatggagaatatcgcgcacaccgtccgtcagccgctgtcggaagcg
gtgctgcgcgccgatattcctcaggccgaacgtattcttcactctctgaaaccggccggt
attttatcgcgcgccgatgtggtgctgccgaatgcgttccaggcactgcatgccgatttc
gaggtggaaaaaccggtgccgcgtctggtcgcccgcctgtttgagctgccggtgcagatt
actctgccgctctattcggtcgaaaataccgggatgccgaagccgctggcctatctggtg
ttgcaggctaactcgacgcgcgtctaccagtttatcctcagcacgctctcgaccatgatt
atcacctatctgttgctggcgctgattctttccgtggcgatcagctggtgcattaaccgg
ctggtggtgcatccgctgcgcaatctctctcgcgaactgcaggagctgccgccccagtcg
attctgacgcacaagctgtcgctaccgcagagccaccgcgatgatgaaatcggtatgctg
gtccgtagctacaaccgcaatcagcaggtgctggagtcaatccatgatgagatgagccgg
ctgacgacccattttcccgtcaccgatctgcccaaccgcactctgtttctggcgctggtc
gatcagtgcatgcgcatgcctgaacagtcactgggtctgatggtcatccgcattgaaacc
ctccaggaagctaacggcgtactcagcgatgagcagcgcgatacactgatgctgacgctg
gtggagaagatccgtaataccctggacgaccatactttgctggcgcagaccggaaccagc
gattttgttctgttaatgaagcgcgcaagcaatccgttccgcgcactgcgtctggcgcgc
aacctgatgattcgcctgaatcagccggttaacctccatcagctgcagttgcgccctaat
ctcagtatcggtctggcgctgcgtgaggatcagccgctgagcgcgaatgagctgcttgac
cgcgcgacgtcggcgatgatgtcggcccgtcatcagggcaaaaatcagatcctgttcttt
gacgccgcactgaccgagcgcgcgcagaagcgcctgactcaggagcatgacatcctgcag
ggtctgcatgatgatcagttcgcgctttacctgcaaccgcaggtcgatatgcggaccggc
gcgttaaccggcgccgaagccctgttgcgcatgcgccagccagacggcagttatggtctt
accgaagaatttattgccagcgccgaagagattggcgtgattagcgcgataggtcgctgg
gtgtttgaagaggcgtgccgcattctggctggctggcagcggcagggcattatgctgccg
ctgagtgtgaatatttccgctgtgcaactgcgggacaccggcgtggtctctcatctgcaa
gccctgctgacgcgccaccgcatcgcacccgacacgctggtgctggaagtgacagagacc
gctcagcttgatgatgcagaacaggcgatgtcgatgctgcgcctgttgcagcagaccggc
gtcgccgtggccctggatgattttggcatgggctactccaacctgaactatctgcatcag
ctgaaagcgttgccggtaaacaagctgaagatggatcgcagcttcgtggcggcgctaccg
catgacgacacaatggtccgtatcgtcgcggctatcgccgagattatccaccttgaagtg
attgccgaaggcgtggaaacagccgagcagcgcgactggcttctggcgcgcggtatcgct
atcgggcagggctatctctacgctgaagccctgcctctgacccgatttaatcaggcgtgg
attgaaaactcctcactgccgcaataa
DBGET
integrated database retrieval system
