Parabacteroides johnsonii: LK449_13750
Help
Entry
LK449_13750 CDS
T07907
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo00190
Oxidative phosphorylation
pjo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LK449_13750
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LK449_13750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pjo03019
]
LK449_13750
Enzymes [BR:
pjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LK449_13750
Messenger RNA biogenesis [BR:
pjo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LK449_13750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
UEA89601
LinkDB
All DBs
Position
complement(3293713..3295782)
Genome browser
AA seq
689 aa
AA seq
DB search
MENSHKYFKRDISWLSFNYRVLLEAEDETLPIYERIKFLSIYSSNLEEFYEIRVAEHRGV
IMKKNFTEESGAEAEETLAEITEEVNRQQREYYRIFSKVLQELNRQDIYLYQDSRPEPFH
EEFVHNFFNEEVFPFLSPVMIQAGDIRTFIRDRRLYLVIRMMKKSKRMADPDYVPDYYYA
LMKIPYAKVPRFIELPTHEGKHYIMFIDDIIRANLSSIFPGYVVESCYSIKISRDADIYL
DDEKGGNIVENIRKKVKKRKIGALSRFMYDSNMPEDFLAFVCSAFGITTDDLVLGGRYNN
LQDLIKLPNPKGKELEQQVPSPMRVPFLDEMGSVFRAVKKRDILLHFPYQSFDYLIRFLM
EAAFDPKVDEIKITQYRVAENSAVINTLISAAQNGKKVTVFVELKARFDEENNMSTAERM
EQAGIRIIYSIPGLKVHAKVAVILRKDTEDGSKRRDFAYLSTGNFNEKTARIYSDMALLT
SNSELITDINKVFAVLEGKLTDPTFRHLLVARFNMVPELTRMIHREIEHVKAGRKGRIIL
KMNGLHDQNMINELYNASENGVEIDLIVRGICCLVPNRPFSANIKVTRIVDMFLEHSRIW
YFYNDGEEELFLTSADWMRRNLNRRIETAFPILNAEIKRNIIDILNIQLQDNVKACLIDE
HLHNNFKRDDNPVKVRAQLAIYEYLKNKI
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggagaattcacataaatactttaaacgtgatattagctggttgtcctttaactatcgc
gttttgctggaggcggaggatgaaacgctccctatctatgagcgtatcaagtttttgtcg
atctattcgtccaatctcgaagagttttacgaaatcagggttgccgagcatcggggagtg
atcatgaaaaagaactttaccgaagaaagcggagcggaagccgaagagacacttgccgaa
atcacagaagaggtgaatcggcagcagcgcgaatattatcgtatcttctccaaagtattg
caagaattgaaccggcaggatatttatttgtatcaggacagccggccggaaccgtttcat
gaggaatttgtgcataattttttcaacgaagaggtgtttcctttcctttcgccagtcatg
atacaggcgggggatatccgtacgttcatacgtgaccgccgtctttatctggttatccgg
atgatgaaaaagagcaagcggatggctgatccggattatgtgccggactattattatgcc
ctgatgaaaatcccgtatgcaaaagtgccccgttttattgaattgcccacgcatgaaggg
aaacattatatcatgtttatcgatgatattatccgggccaatttgtccagtatcttcccc
ggctatgtggtggagagttgttacagcatcaagatttcaagagatgctgatatttacctg
gatgacgagaaaggagggaatatcgtggaaaacattcgcaagaaagtgaaaaagcgtaag
attggtgccttgagtcggtttatgtacgatagcaatatgcctgaagattttctggcgttt
gtatgcagtgcctttggtattaccacggacgatctggtattggggggacggtataacaat
ttgcaggacctgatcaagctgccgaatccgaaggggaaagagctggaacaacaggttccg
tctcccatgcgtgtgcctttcctggacgagatgggctctgtcttccgggcagtgaaaaag
cgggatatcctgttgcattttccttaccagtctttcgactacctgatccgtttcctgatg
gaggcggcttttgatccgaaagtggatgaaattaaaatcacgcaataccgggtggcggag
aattcggccgttatcaacacgttgatcagtgctgcgcagaatgggaagaaggtaacggtc
tttgtagagctaaaagctcgtttcgacgaagagaacaatatgagtacggctgaacggatg
gagcaggcaggtatccgtattatctatagcattcccggcttgaaagtgcatgcaaaagtg
gcggttatcctgcggaaagatacggaagacggcagtaagcggagggattttgcctatctg
agtaccggtaatttcaatgaaaaaacggcacgtatctattctgatatggcgttgctgact
tcgaattcggaattgataaccgacataaacaaagtgtttgcagtgctggaagggaagttg
accgatccgacattccgccacttgctggttgcccgttttaatatggtgccggaactgact
cgtatgatccatcgggagatcgaacatgtgaaggctgggcgtaaaggccgcatcatattg
aagatgaacggacttcatgatcagaatatgatcaatgaactgtataatgcgagtgagaac
ggggtggaaatcgacctgattgtccgggggatttgttgcctggttccgaaccgtccgttc
agtgcgaatatcaaggttactcgtatagtggatatgtttctggaacattctcgcatctgg
tacttctataatgacggtgaagaggagctgttcctgacttctgccgattggatgcgccgg
aacctgaataggcgtatagagactgctttcccgattctgaatgcggagattaagcgaaat
atcatagatatcctgaatatccagttgcaagataatgtaaaagcctgtttgatcgacgaa
catctacataacaatttcaaacgggatgacaacccggtgaaagtccgggcacaactggca
atttatgaatatctgaaaaacaaaatatag
DBGET
integrated database retrieval system
