Pseudomonas juntendi: L1P09_19110
Help
Entry
L1P09_19110 CDS
T08267
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pju
Pseudomonas juntendi
Brite
KEGG Orthology (KO) [BR:
pju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pju03009
]
L1P09_19110 (rimO)
Enzymes [BR:
pju01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
L1P09_19110 (rimO)
Ribosome biogenesis [BR:
pju03009
]
Prokaryotic type
ribosomal protein modification factors
L1P09_19110 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UJM11409
LinkDB
All DBs
Position
4104498..4105829
Genome browser
AA seq
443 aa
AA seq
DB search
MSTTPATPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAK
AESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLSVTGPQQYEQVVNAVHEVVPPR
QDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSEAE
RLVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHYVY
PYPNVDDVIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDRTLARIKQWREQCPELV
IRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLAEIPDDIKQD
RWDRFMAHQQAISAARLQLRIGKEIEVLIDEVEAQGSVGRSFFDAPEIDGSVFIDGDHGF
KPGDKVRCRVVDADEYDMWAEPV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccacgcccgccacccccaaggtaggtttcgtaagcctgggttgccccaaagcc
ctggtcgattccgagcgcatcctgacccagctgcgcatggaaggctatgaagtcgtgccc
acctacgaggatgccgacgtggtggtggtcaacacctgcggcttcatcgacagtgccaag
gccgaatcgctggaagtcatcggcgaagcgatcaaggaaaacggcaaggtcatcgtgacc
ggctgcatgggcgttgaagaaggcaacatccgtgacgtgcacccaagcgtgctgtcggtc
acaggcccgcaacagtacgagcaggtggtcaacgccgtgcacgaagtggtgccaccccgc
caggaccacaacccgctgatcgacctggtaccgccacaaggggtcaagttgaccccgcgc
cactacgcctacctgaaaatttccgaaggctgcaaccacagctgcagcttctgcatcatc
ccgtcgatgcgcggcaagctggtcagccgcccggtgggcgaagtgctgagcgaggccgag
cgcctggtgaaggccggggtcaaggagatcctggtgatttcccaggacaccagcgcctat
ggcgttgacgtcaagtacaagaccgacttctggaacggccgcccggtcaagacgcgcatg
cttgaactgtgcgaagcactgagcagcctgggagcctgggtgcgcctgcactacgtgtac
ccttacccgaatgtcgacgatgtgatcccgttgatggcggccggcaagatcctgccgtac
ctggacattccgttccagcatgccagcccgaaagtgctcaagtcgatgaagcgcccggct
ttcgaagaccgtaccctggcacgcatcaagcaatggcgtgaacagtgccccgaactggtg
atccgttccaccttcatcgtcggcttccccggcgaaaccgaagaagacttccagtacctg
ctggactggctgaccgaagcccagctcgaccgcgtgggctgcttccagtactcgccggtg
gagggcgccccggccaacgacctgggcctggctgaaataccggacgacatcaagcaggac
cgttgggaccgtttcatggcccaccagcaggccatcagcgctgcccgcctgcaactgcgc
atcggcaaggagatcgaagtgctgatcgacgaagtcgaggcgcaaggttcggtaggccgc
agcttcttcgatgccccggaaatcgacggcagcgtgttcatcgatggcgaccatggcttc
aagccaggcgacaaggttcgttgccgggtggtagacgccgacgaatacgacatgtgggcc
gagccggtctga
DBGET
integrated database retrieval system
