Pseudomonas knackmussii: PKB_0886
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Entry
PKB_0886 CDS
T03081
Name
(GenBank) putative lipoprotein
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PKB_0886
Enzymes [BR:
pkc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PKB_0886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
CDF82252
UniProt:
A0A024HCL5
LinkDB
All DBs
Position
complement(917759..919855)
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AA seq
698 aa
AA seq
DB search
MHKESSTLKLDPRHRLSLKLLRVVLLAALVVGVVLSCAQIVFDAYKARQAVHSDAQRILA
MVRDPSTQAVYSLDRDMAMQVLEGLFQHEAVRYAAIGHPDEPMLAEKSRPLLDSPTRWLT
DPILGPEQHYSIRLVGRGDPGEYYGDLKITLDTAPYGQDFVVTSIIIFISGILRALAMAL
VLFLVYHWLLTKPLWRIIDNLSSINPDRPGEHKLPMLQGHEQNELGLWINTANQLLESIE
RNGHLRREAEDSLLRISQYDFLTGLPNRKLLQQRLDQILSDAGRLEHRVAVLCLGLDDFK
GINEQHGYQFGDQLLIALADRLRAHSANLGALARLGGDQFTLIQADIEQPYEAAELAQRI
LDDLEQPFQLDQQSVQLRATIGITLYPEDGESTEKLLQKAEQTMTLAKTRSRNRYQFYIA
SVDSEMRRRRELEKDLRDALSRDELHLVYQPQVDYRDHRVVGVEALLRWQHPTQGWVAPD
LFIPLAEQNGSIFAIGEWVLDQACRQLREWHDQGFDDLRMAVNLSTIQLRHSALPRVVSN
FLQIHRLPPRSLELEVTETGLMEDISTAAQHLLSLRRAGALIAIDDFGTGYSSLSYLKSL
PLDKIKIDKSFVQDLLQDDDDATIVRAIIQLGKSLGMQVIAEGVETVEQEAYIIAQGCHE
GQGYLYSKPLPARELTLYLKQARRLAEAAGSPPSIERR
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaggaaagcagcaccttgaaactggacccccggcaccgactctcactgaagctg
ctgcgcgtagttctgctcgcggcgttggtggtcggcgtcgtcctgagttgcgcacagatc
gtcttcgatgcctacaaggcccgccaggccgtgcattccgatgcccaacgcatcctggcc
atggtccgcgacccctcgacccaggcggtctacagtctcgaccgcgacatggcgatgcag
gtcctcgaaggcctgttccagcacgaggccgtgcgctatgccgccatcggccaccccgac
gaacccatgctggcggagaagtcccgcccgctgctggacagcccgacccgctggctcacc
gaccccatcctcggccccgagcagcactattcgatccgcctggtcggccgcggcgacccg
ggcgagtactacggcgacctgaagatcaccctggacaccgccccctacggccaggacttc
gtcgtcacctcgatcatcattttcatctccggcattctccgcgccctggccatggccctg
gtgctgttcctggtctaccactggctgctgaccaaaccgctctggcggatcatcgacaac
ctgtcgagcatcaaccccgaccgccccggcgagcacaagctgcccatgcttcaaggccac
gagcagaacgagctcggcctgtggatcaacaccgccaaccagttgctggaatccatcgag
cgcaacggccacctgcgccgcgaagccgaggacagcctgctgcgcatctcccagtacgac
ttcctcaccggcctgccgaaccgcaagctgctgcagcagcgcctggaccagatcctctcc
gacgccggccgcctggagcaccgcgtggccgtgctgtgcctgggcctggacgacttcaag
ggcatcaacgagcagcacggctatcagttcggcgaccagttgctgatcgccctcgccgac
cgcctgcgcgcccacagcgccaatctcggcgccctggctcgcctgggcggcgaccagttc
accctgatccaggccgacatcgagcaaccctacgaggcggcggaactggcgcaacggatc
ctcgacgacctcgagcagcccttccagctcgaccagcagtcggtccagctgcgcgccacc
atcggcatcaccctctaccccgaagacggcgagagcaccgagaagctgctgcagaaagcc
gagcagaccatgaccctggccaagactcgctcgcgcaaccgctaccagttctacatcgcc
agcgtcgacagcgagatgcgccgccgccgcgagctcgagaaggacctgcgcgacgccctg
tcccgcgacgaattgcacctggtctaccaaccgcaggtggactaccgcgaccaccgggtg
gtcggcgtcgaggccctgctgcgctggcagcacccgacccagggctgggtcgcaccggac
ctgttcatcccgctggcggagcagaacggcagcatcttcgccatcggcgagtgggtgctc
gaccaggcctgccggcaactgcgcgaatggcatgaccagggcttcgacgacctgcgcatg
gccgtcaacctgtcgaccatccagctacgccacagcgccctgccgcgcgtggtcagcaac
ttcctgcagatccaccgcctgccgccgcgctcactggaactggaagtcaccgaaaccggc
ctgatggaagacatttccaccgccgcccagcacctgctcagcctgcgccgcgccggcgca
ctgatcgccatcgacgacttcggtaccggctactcctcgctcagctacctgaagagcctg
ccgctggacaagatcaagatcgacaagagcttcgtgcaggacctgctgcaggacgacgac
gacgccaccatcgtccgcgccatcatccagctcggcaaaagcctcggcatgcaggtcatc
gccgaaggcgtggagaccgtcgagcaggaggcctacatcatcgcccagggttgccacgag
ggtcagggttacctctacagcaagccgctgcccgcccgcgagctgaccctctacctgaag
caggcgcgacgcctggccgaagccgccggaagccccccctccatcgaacgacgctga
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