Pseudomonas knackmussii: PKB_4099
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Entry
PKB_4099 CDS
T03081
Symbol
mnmC
Name
(GenBank) tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkc03016
]
PKB_4099 (mnmC)
Enzymes [BR:
pkc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
PKB_4099 (mnmC)
Transfer RNA biogenesis [BR:
pkc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PKB_4099 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
FAD_binding_2
Pyr_redox
GIDA
FAD_binding_3
Pyr_redox_2
FAD_oxidored
HI0933_like
3HCDH_N
Methyltransf_24
Lycopene_cycl
AlaDh_PNT_C
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
CDF85428
UniProt:
A0A024HLV5
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All DBs
Position
4307572..4309536
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AA seq
654 aa
AA seq
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MPDLHSAQLDWDDNGQPLSRVYGDVYFSRASGLDETHHVFLDGNQLPRRFAALPAGGCLC
IGETGFGTGLNFLCAWRLFEALAPADARLHFVSVEKFPLRRDDLVRALALWGDLQPWSEQ
LLAQYHAIHPGFQRLVFAGGRVVVTLLVGDVLDCLPELDASIDAWFLDGFSPAKNPEMWT
QPLFQQLARLSAPGATLATFTSAGFVRRGLIEAGFAMQRVKGFGQKREMLVGTFEGPAEG
ATVPWYARPPRAAGERHALVIGGGLAGCASAASLAGRGWRVTLIERHAELAMEASGNPQG
VLYLKLSAHGTALSRLIVSGFGHTRRLLERLQRGSDWDACGVLQLAFDEAEGKRQAQLAD
AFPENLLQTLSQEQAETIAGVTLPAGGLFFPEAGWVHPPALCRALASHPNISVQTCHEVR
VQREDGQWSAWSGEQRLAIAPVAVLATAAEVRAFPAAASLPLKRIRGQISRLPANAESAA
LRTVVCAEGYVAPPRLGEHTLGASFDFHNDDLQPTVEEHQGNLELLREISPDLLARLGAG
KLDPATLEGRAAFRCTTPDYLPLIGPLAEREAFAAAYAVLGKDARQVPDAACPWLEGLYL
NSAHGSRGLITAPLSGELLAAWIEGEPLPLPRKVAEACLPNRFLLREVVRGQKA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacctccacagcgcccagctcgactgggacgacaacggccagccgctctcgcgc
gtctacggcgacgtgtacttctcccgcgcgtcgggcctggacgagacacaccacgtgttc
ctcgacggcaaccagctgccgcgacgcttcgccgcgctccccgccggcggttgcctgtgc
attggcgaaaccggttttggcaccgggctcaacttcctctgcgcctggcgcctgttcgaa
gccctggcaccggcggatgcccgcctgcatttcgtcagcgtggagaaattccccctgcgc
cgcgacgacctggtccgcgccctcgccctctggggcgacctgcagccctggagcgaacag
ctgctggcgcagtaccacgccatccatccgggcttccagcgcctggtgttcgccggcggc
cgcgtggtcgtcaccctgctggtgggcgacgtgctggattgcctgcccgagctggacgca
agcatcgatgcctggttcctcgacggtttctcgccggcgaagaacccggagatgtggacc
cagccgctgttccagcaactcgcgcggctgtccgcccccggcgcgaccctggccaccttc
accagcgccggtttcgtccgccgcggcctgatcgaggccggcttcgccatgcagcgggtc
aagggcttcgggcagaaacgcgagatgctggtcggcaccttcgaaggtcccgccgaaggc
gcgaccgtaccctggtatgcgcgcccaccgcgcgcagcaggcgagcgccacgccctggtg
atcggcggcggcctggccggttgcgccagcgccgccagcctggccggacgcggctggcga
gtcaccctgatcgaacgtcacgccgagctggccatggaagcatccggcaacccccagggc
gtgctctacctcaagctctcggcccacggcaccgcgctctcgcgcctgatcgtcagcggc
ttcggccacacccgtcggctgctcgaacgcctgcaacgcggcagcgactgggacgcctgc
ggcgtactgcaactggccttcgacgaagccgagggcaagcgccaggcgcaactggccgac
gcctttccggaaaacctgctgcaaaccctgtcgcaggagcaggccgaaaccatcgccggc
gtcaccttgcccgccggagggctgttcttccccgaagccggctgggtacatccaccggcc
ttgtgccgggcgctggcgagccatccgaacatcagcgtgcagacctgccatgaagtgcgc
gtgcagcgcgaggacgggcagtggagcgcctggagcggcgagcaacgcctggccatcgcg
ccggtcgcggtgctcgccaccgccgccgaagtgcgcgccttccccgctgcggcgagcctg
ccgctcaagcgcatccgcggacagatcagccgcctgccggccaacgccgaaagcgcagcc
ctgcgcaccgtggtttgcgcggaaggctacgtcgccccgccgcgcctgggtgaacacacc
ctcggcgccagcttcgatttccacaacgacgacctgcagccgaccgtcgaagagcaccag
ggcaacctcgaacttttgcgagaaatctcccctgaccttctcgcgcgcctgggcgctggt
aagctcgacccggccacgctggagggccgcgcggccttccgttgcaccacgccggactac
ctgccgctgatcggcccgctggccgaacgcgaagccttcgccgccgcctacgcggtgctg
ggcaaggatgcccgccaggtgccggatgccgcctgcccctggctcgaagggctatacctg
aacagcgcccacggctcgcgcggactgatcaccgccccgctttccggcgaactgctcgcg
gcctggatcgaaggcgagccattgccgctgccgcgcaaggtcgccgaggcctgcctgccg
aaccgtttcctgctgcgtgaggtagtgcgcggccagaaggcctga
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