Pseudomonas knackmussii: PKB_5410
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Entry
PKB_5410 CDS
T03081
Symbol
thiI
Name
(GenBank) tRNA sulfurtransferase
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00730
Thiamine metabolism
pkc01100
Metabolic pathways
pkc01240
Biosynthesis of cofactors
pkc04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PKB_5410 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PKB_5410 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkc03016
]
PKB_5410 (thiI)
Enzymes [BR:
pkc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
PKB_5410 (thiI)
Transfer RNA biogenesis [BR:
pkc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PKB_5410 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
ADH_N_2
DUF2934
Motif
Other DBs
NCBI-ProteinID:
CDF86722
UniProt:
A0A024HQ88
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All DBs
Position
complement(5711157..5712611)
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AA seq
484 aa
AA seq
DB search
MKLIVKVFQEITIKSRPVRKRFIRQLAKNIRTVLRDLDPELRVEGEWDNLDVETKVTEPK
VLREMIERLTCVPGIGHFLEVHEYPLGDFDDILEKCKAHFGDKLQGKIFSMRCKRAGHHS
FTSIDVERYVGGGLRQHCGAAGVSLKNPEVEVRVEIRHDRLYVIHAQHNGIGGYPLGALE
QVLVLMSGGFDSTVAAYQMMRRGLISHFVFFNLGGRAHELGVMEVAHYLWEKYGRSQRVL
FVSVPFEEVVGEILTKVDDSYMGVTLKRMMLRAASRVAERLELNALVTGEAISQVSSQTL
PNLSVIDRVTDTLVLRPLIASHKQDIIDTATQIGTAEFAKHMPEYCGVISVNPTTQAKPY
RVEHEETKFDMAVLDRALERATQMTVDRVIDELGKDLPVEMVGEVLPGQIVVDIRHPDAQ
EDEPLELEGIEVLPMPFYAINSKFKELDPNRQYLLYCDKGVMSRLHAHHLVNEGHTNVRV
YRPQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcatcgtcaaggtcttccaggaaatcaccatcaagagccggccggtgcgcaag
cgctttatccgccagctggccaagaacattcgcaccgtgctgcgcgacctggatccggag
ctgcgggtcgagggcgaatgggacaacctggacgtcgagaccaaggtcaccgagcccaaa
gtcctgcgcgagatgatcgagcgcctgacttgcgtgccgggcatcggccacttcctggaa
gtgcacgaatacccgctgggcgacttcgacgacatcctcgagaagtgcaaggcgcacttc
ggcgacaagctgcagggcaagatcttctcgatgcgctgcaagcgcgccggccatcacagc
ttcacttccatcgacgtcgagcgttatgtcggcggcggcctgcgccagcactgcggtgcg
gccggcgtatcgctgaagaacccggaagtggaagtgcgcgtggaaatccgccacgaccgc
ctgtacgtcatccacgcccagcacaatggcatcggcggttatccgctcggcgccctggag
caggtgctggtgctgatgtcgggtggcttcgactccaccgtcgccgcctaccagatgatg
cgccgcgggctgatcagccacttcgtgttcttcaacctcggcggccgcgcccacgagctg
ggcgtgatggaagtcgcccactacctgtgggagaagtacggccgttcgcagcgcgtgctc
ttcgtcagcgtgcccttcgaggaagtggtcggcgagattctcaccaaggtcgacgacagc
tacatgggcgtgaccctgaagcgcatgatgctgcgcgctgccagccgtgtggccgagcgc
ctggagctgaacgcgctggtcaccggcgaggcgatttcccaggtctccagccagaccctg
ccgaacctctcggtgatcgaccgggtgaccgacaccctggtcctgcgcccgctgatcgcc
agccacaagcaggacatcatcgataccgccacgcagatcggcaccgccgagttcgccaag
cacatgcccgagtactgcggcgtgatctcggtgaacccgaccacccaggccaagccctac
cgcgtcgagcacgaagagaccaagttcgacatggccgtgctcgaccgcgccctggaacgc
gccacgcagatgaccgtggaccgggtgatcgacgagctgggcaaggacctgccggtagaa
atggtcggcgaagtgctgcccggccagatcgtcgtggacatccgtcatccggatgcgcag
gaagatgaaccgctggagctggaaggcatcgaagtgctgcccatgccgttctacgcgatc
aacagcaaattcaaggaactggacccgaaccgccagtacctcctgtattgcgacaagggc
gtgatgagccgcctgcatgctcaccacctggtcaacgaagggcacaccaatgtgcgcgtt
taccgcccgcaataa
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