Pseudomonas kribbensis: DLD99_02030
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Entry
DLD99_02030 CDS
T06348
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pke
Pseudomonas kribbensis
Pathway
pke00730
Thiamine metabolism
pke01100
Metabolic pathways
pke01240
Biosynthesis of cofactors
pke04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DLD99_02030
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DLD99_02030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pke03016
]
DLD99_02030
Enzymes [BR:
pke01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
DLD99_02030
Transfer RNA biogenesis [BR:
pke03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DLD99_02030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AXI59291
UniProt:
A0A345RJ25
LinkDB
All DBs
Position
422609..424063
Genome browser
AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSRPVRTKFIRQLAKNIRTVLRDLDPAVVVNGVWDNLELETRVTDPK
ALKEMGERLTCMPGIAHFLQIDEYPLGDFDDITEKCKQHYGDALAGKIFSVRCKRAGKHA
FSSMDVEKYVGSKLRRECGAAGIDLKAPEIEVRIEVRDKRLFVIHSQHNGIGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDNSHMGVVLKRMMLRASSAIAERLHIDALVTGEAISQVSSQTL
PNLSVIDCVTDKLVLRPLIVAHKQDIIDTANEIGTADFARHMPEYCGVISVNPKTAAKRG
RVEHEEQEFDMAVLERALANARLVPIDRVIDELGQDLQIEEVSEALAGQIVIDIRHPDAA
EDEPLELEGIEVQTMPFYAVNARFKELDPTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaatcgtaaaagtcttccccgagatcaccatcaaaagccgacctgtccggacg
aaattcatccgccagttggccaagaacatccgcaccgtgctccgcgacctggacccggcc
gtggtggtgaacggtgtgtgggacaatctcgagctggaaacccgcgtgaccgatcccaag
gccctgaaagagatgggcgagcgcctgacctgcatgccgggcatcgcgcactttctgcag
atcgacgagtacccgctgggcgacttcgacgacatcaccgagaagtgcaagcagcactac
ggcgatgcactggccgggaagattttctcggtgcgctgcaaacgtgcgggcaagcatgca
ttcagctcgatggacgtcgaaaaatacgtcggcagcaagctgcgccgtgagtgtggtgct
gccggtatcgatctgaaagcgccggaaatcgaagtccgcatcgaagttcgcgacaaacgg
ttgtttgtcatccacagccagcacaatggcatcggcggctacccgctcggtgcgctggag
cagacgctggtattgatgtccggcggctttgactcgacggttgcggcctaccagatcatg
cgtcgcggcctgatggcgcacttctgcttcttcaatctgggcggtcgtgcccacgaattg
ggcgtgatggaagtcgcgcatttcatctggaagaagtacggcagctcgcaacgcgtgcta
tttgtcagtgttccatttgaagaagtcctgggcgaaattctcggcaaggtcgataacagt
catatgggcgtcgtattgaagcgtatgatgttgcgcgcctcctcggccatcgccgagcgc
ctgcacattgatgcgctggtcaccggcgaggcgatctcccaggtgtcgagccagacgctg
ccgaacctgtcggtgatcgactgcgtgaccgacaaactggtcctgcgcccgctgatcgtc
gcccacaagcaggacatcatcgacacggccaacgagatcggcaccgccgatttcgcccgg
cacatgccggagtactgcggggtcatttcggtcaatccgaagaccgccgccaagcgtggc
cgggtcgagcacgaagagcaggaattcgacatggcggtgctcgagcgtgcgctcgcaaac
gccagactggtgccgatcgatcgggtgatcgacgaattgggccaggatttgcaaatcgaa
gaagtcagcgaggcactggccggccagatcgtcatcgacatccgtcacccggatgccgcc
gaggatgagccgctggaactcgagggcatagaagtacagacgatgccgttctatgcagtg
aacgcacgtttcaaggaactggaccctactcgccagtacctgctgtattgcgacaaaggc
gtgatgagtcgcctgcatgctcaccatttgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa
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