Pseudomonas kribbensis: DLD99_19375
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Entry
DLD99_19375 CDS
T06348
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pke
Pseudomonas kribbensis
Pathway
pke00071
Fatty acid degradation
pke00280
Valine, leucine and isoleucine degradation
pke00310
Lysine degradation
pke00362
Benzoate degradation
pke00380
Tryptophan metabolism
pke00410
beta-Alanine metabolism
pke00640
Propanoate metabolism
pke00650
Butanoate metabolism
pke00907
Pinene, camphor and geraniol degradation
pke00930
Caprolactam degradation
pke01100
Metabolic pathways
pke01110
Biosynthesis of secondary metabolites
pke01120
Microbial metabolism in diverse environments
pke01200
Carbon metabolism
pke01212
Fatty acid metabolism
Module
pke_M00087
beta-Oxidation
pke_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DLD99_19375 (fadB)
00650 Butanoate metabolism
DLD99_19375 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
DLD99_19375 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DLD99_19375 (fadB)
00310 Lysine degradation
DLD99_19375 (fadB)
00380 Tryptophan metabolism
DLD99_19375 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DLD99_19375 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
DLD99_19375 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DLD99_19375 (fadB)
00930 Caprolactam degradation
DLD99_19375 (fadB)
Enzymes [BR:
pke01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DLD99_19375 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
DLD99_19375 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
DLD99_19375 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
DLD99_19375 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AXI62548
UniProt:
A0A345RTD2
LinkDB
All DBs
Position
complement(4260752..4262899)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSTKAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRPEDAL
KVGAVDAVVAPEKLQDAALELIKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAIATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaagctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtcttaccctgaacgaactg
cgtcaggccgtagacaccatcaaggcagatgcttcgatcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgacaacttcaagctg
ccggatgccgagctggttgctggcaatctcgaagccaacaagatcttcagcgatttcgaa
gacctcaatgttccgaccgtggccgcgatcaatggcatcgccctgggtggcggtctggaa
atgtgcctggcggcggactaccgtgtcatgtccaccaaggccaagatcggtctgccggaa
gtcaagctgggcatctacccgggcttcggcggtaccgtgcgtctgccgcgcctgatcggt
gccgacaacgctatcgagtggattgccgccggcaaggaaaaccgtcctgaagacgcgctg
aaagtcggcgccgtcgatgccgtggttgcccctgaaaagctgcaggatgctgcccttgaa
ctgatcaagcgcgccatctccggcgagttcgactacaaggccaagcgtcagccgaagctg
gaaaagctcaagctgaacgctattgaacaaatgatggctttcgaaaccgccaagggtttc
gtggctggccaggccggcccgaactacccggccccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgtgacaaggcactggaagtcgaagctgcaggtttcgtgaag
ctggccaagacctctgccgcgcagagcttgatcggtctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggctgccgtattg
ggcgccggcatcatgggtggcggtatcgcctatcagtcggcctccaaaggtacgccgatc
ctgatgaaggacatcaacgagcacggcatcgagcaaggtctggcggaagccgccaagctg
ctggtcggccgcgttgataaaggccgcatgactgccgcgaagatggctgaagtgctcaac
ggcattcgtccgaccctgtcctacggcgatttcggtcacgttgacctggtcgttgaagcc
gtggtcgagaaccctaaggtcaagcaagccgttctggcggaagtcgaagacaaggtcaaa
gaggacaccatcctcgcgtccaacacctcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggtatgcacttcttcaacccggtgcacatgatgcca
ctggtggaagtgatccgtggcgagaagtccagcgagctggcgattgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aaccgcgtactgttcccgtacttcggcggtttcgccaagctggtcagcgctggtgtggac
ttcgtccgtatcgacaagatcatggaaaaattcggctggccgatgggcccggcatacctg
atggacgtggtcggcatcgacaccggccaccacggtcgtgacgtgatggctgaaggcttc
ccggaccgcatgaaggacgaccgtcgttcggccatcgacgtgctttacgaagccaagcgt
ctgggtcagaagaacggcaagggcttctatgcctacgaggccgacaagaaaggcaagcag
aagaaagttgccgatccgtcggtactggaagtgctcaagccgatcgtctacgagcagcgt
gaagtcactgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgtcgaaaccgccgccgaagccgacatgggtctggtctac
ggtattggtttccctccattccgtggcggtgcgctgcgctacatcgactcgatcggtgtt
gccgagttcgttgccctggccgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcgaagctgcgcgaaatggccaagaacggccagagcttcttcggttaa
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