Pseudomonas kribbensis: DLD99_22670
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Entry
DLD99_22670 CDS
T06348
Name
(GenBank) GGDEF domain-containing protein
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pke
Pseudomonas kribbensis
Pathway
pke02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
DLD99_22670
Enzymes [BR:
pke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
DLD99_22670
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
dnstrm_HI1420
FtsL
Motif
Other DBs
NCBI-ProteinID:
AXI63161
UniProt:
A0A345RV45
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All DBs
Position
4972157..4974208
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AA seq
683 aa
AA seq
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MKLELKNSLSVKLLRVVLLSALIVGVVLSCAQIVFDAYKTRQAVAGDAERILDMFRDPST
QAVYSLDREMGMQVIEGLFQDDAVRQASIGHPNEAMLAQKSRELQQSSSRWLTDLILGQE
RTFTTQLVGRGPYSEYYGDLSITLDTATYGQGFIVSSVIIFISGVLRALAMGLVLYLVYH
WLLTKPLSRIIEHLTEINPDRPSEHKIPQLKGHEKNELGIWINTANQLLESIERNTHLRH
EAENSLLRMAQYDFLTGLPNRQQLQQQLDKILVDAGKLQRRVAVLCVGLDDFKGINEQFS
YQTGDQLLLALADRLRAHSGRLGALARLGGDQFALVQADIEQPYEAAELAQSILDDLEAP
FALDHQEIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKTRSRNRYQFYIASVDSEMR
RRRELEKDLRDALLRDQFYLVYQPQISYRDHRVVGVEALIRWQHPEHGLVPPDLFIPLAE
QNGTIIAIGEWVLDQACKQLREWHDQGFVDLRMAVNLSTVQLHHAELPRVVNNLLQMYRL
PPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI
DKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIISEGCHEGQGYHYS
KPLPARELSVYLKQAQRSNAAIL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctggaactcaagaacagcttgtcggtgaagttgctccgggtcgtgctcctgtcg
gcattgatcgtcggcgtggtcttgagctgcgcgcagattgtcttcgatgcctataaaacc
cgtcaggccgtcgccggcgatgccgaacgcatcctcgacatgttccgcgatccctcgacc
caggcggtctacagcctggaccgggaaatgggcatgcaggtaatcgaaggcctgttccag
gacgacgccgtgcgccaggcctccatcgggcatcccaacgaagcgatgctcgcgcagaaa
tcccgtgaattgcagcaatccagcagccgctggctgaccgacctgatcctcggccaggaa
cgaaccttcaccacccaattggtggggcgcggtccctacagcgaatattacggcgacctg
agcatcaccctcgacaccgccacctacggccagggtttcatcgtcagctcggtgatcatc
ttcatttccggcgtgttgcgcgccctggccatggggctggtgttgtatctggtctatcac
tggctgctgaccaaacccctgtcgcggatcatcgagcacctcacggaaatcaacccggat
cgccccagcgaacacaagattccgcagctcaagggtcacgagaaaaacgaactcgggatc
tggatcaacaccgccaaccagttgctcgaatccatcgaacgcaacacccatctgcgccac
gaagcggaaaacagcctgctgcgcatggcccaatacgactttctcaccggtctgccgaac
cgccagcagttgcagcagcaactggacaagattttggtggatgccggcaagctgcagcgc
cgggtcgcggtgttgtgcgtcgggctggatgatttcaaaggcatcaacgaacagttcagc
taccagaccggcgaccagttgctgctggccctggcggatcgcctgcgtgcccacagcgga
cgcctcggcgccctcgcccgactgggtggcgaccagttcgccctggtgcaggccgacatc
gagcagccttacgaagctgcggaactggcgcaaagcatcctcgacgacctggaagccccg
ttcgccctggatcatcaagagattcgcctgcgcgcgaccatcggcatcaccctgttcccg
gaggatggtgacagcaccgagaagctgttgcagaaagccgagcagaccatgaccctggcc
aagacccgctcgcgcaaccgctatcagttctatatcgccagcgtcgacagcgagatgcgc
cgccgtcgcgagctggaaaaagacctgcgcgacgccctgctgcgggatcagttctacctc
gtctatcaaccacagatcagctaccgcgatcaccgcgtggtcggcgtcgaggcgctgatt
cgctggcaacacccggagcacggacttgtgccgccggacctgttcattccgctggccgaa
cagaacggcaccatcatcgccatcggtgagtgggtgctggatcaggcctgcaagcaactg
cgtgaatggcacgatcagggtttcgtcgacctgcgcatggcggtcaacctgtccaccgtg
caactgcaccacgccgagctgccgagagtggtcaacaacctgttgcagatgtaccgcctg
ccaccgcgcagcctggaactggaagtcaccgaaaccggcctgatggaagacatcagcacc
gccgcccagcacttgctgagcctgcgccgctccggcgcactgatcgccatcgacgacttc
ggaaccggctattcctcgctgagttatctcaagagtctgccgctggacaagatcaagatc
gacaagagcttcgtccaggacctgctggatgacgacgatgacgcgactatcgttcgcgcc
atcattcaactgggcaagagcctgggcatgcaggtgatcgccgaaggcgtggaaaccgcc
gaacaggagacctacatcatctccgaaggctgccacgaaggtcagggctatcactacagc
aagccgctgccggcgcgggaactgagcgtgtatctcaagcaggcgcaacgcagcaacgcc
gccattctctga
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